Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq15 378 1e-99 seq28 147 3e-30 >seq15 Length=271170 Score = 378 bits (418), Expect = 1e-99 Identities = 1337/2080 (64%), Gaps = 53/2080 (3%) Strand=Plus/Plus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 ||| || | |||||||||||| | || || || | || ||||| || ||||||||||| Sbjct 87849 CTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACC 87908 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||| |||| || |||| || || || ||||| || |||| ||| | | || Sbjct 87909 AGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGG 87968 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | | | ||||| |||| ||||||| ||||||||| | ||| |||||| || || Sbjct 87969 AGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGC 88028 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | Sbjct 88029 CATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTG 88088 Query 77012 ATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 || || | ||| | ||||||||| || || ||||| || || ||| || || Sbjct 88089 CTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCAT 88148 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 | ||| | ||| | | || || | | | | | | ||||||||| ||||| Sbjct 88149 GTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTG 88208 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||||||||| ||||| | || | ||| || || || || ||||| | | | || Sbjct 88209 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 88268 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||| |||| |||||| | ||| |||||||| ||||||||||| || | || || Sbjct 88269 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 88328 Query 77249 TCTGAGACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 ||| | ||| |||| | | || |||| || ||| ||| ||||| || || || | Sbjct 88329 TCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88387 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 | ||||| | || ||||| | ||| || | | || || || | | | Sbjct 88388 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88447 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 |||| || | ||||||| | |||| ||| |||||||| ||| | | || | Sbjct 88448 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88507 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | ||||| ||||||| |||| || | || ||||| | |||||| ||| | | | Sbjct 88508 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTC 88566 Query 77488 AAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 || ||||| ||||| ||||| || ||||| || | | | |||||||||| | | || Sbjct 88567 AACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATA 88626 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || | |||||||||||| || ||| |||| |||| |||||| | || | || Sbjct 88627 TTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTA 88686 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACA 77666 | | ||| ||||| | || | || || ||| | | | ||| | | | Sbjct 88687 CGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGT----TGTACCAGCAGTGAGT 88742 Query 77667 AACATG---TTCAA-------------AGCTATAGATGCTAGATTACAAACTGCTACCTC 77710 | ||| ||||| ||| ||||| || | ||||| || || ||| Sbjct 88743 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTC 88802 Query 77711 ATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAG 77770 | | | | |||| | || || || || ||| |||| || |||| Sbjct 88803 TTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAA 88862 Query 77771 ATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGT 77830 || | ||||| | ||||| || || | |||||||| || || || ||||| || || Sbjct 88863 GTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGT 88922 Query 77831 TTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTA 77890 ||| | |||| || | || | | ||| | | ||||| || | ||||| Sbjct 88923 TTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTC 88978 Query 77891 T----CGCCTCTCTCTTTCATAT--TGAGTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | || | || |||| ||| | ||| | || |||||||||||||| | || Sbjct 88979 TTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGAC 89036 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 || | | ||||| |||| |||| | | || | ||| || |||| | | || Sbjct 89037 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 89096 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || |||||| || |||||||| ||||| | ||| |||| |||| | ||| || Sbjct 89097 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 89156 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 || || || ||||| || ||| | || | | || || | ||||||||| || Sbjct 89157 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 89216 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||| ||||| ||||| || || || | ||| | || || Sbjct 89217 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 89276 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || | || |||| ||||||||||||||| || || || || || || |||| ||| Sbjct 89277 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 89336 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 || ||| | || ||||||||| |||| | || ||||| || || | || || Sbjct 89337 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 89396 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 |||| ||| || ||||| |||||||| || || || || ||||||| |||| Sbjct 89397 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 89456 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 || | ||||| |||||||| | ||| || || || ||||| | || ||||| Sbjct 89457 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 89516 Query 78425 TGCATGCGTAAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTA 78480 ||||| || || | || ||| |||| || || ||||||||| || | | | Sbjct 89517 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 89572 Query 78481 TGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCG 78540 |||| |||||| || | || |||||||| | || || ||||| | ||| | Sbjct 89573 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 89632 Query 78541 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 78600 ||| ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| | Sbjct 89633 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 89692 Query 78601 ATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAA 78660 | ||||||||| ||||| | |||| |||| || || | ||| || ||| |||| Sbjct 89693 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAA 89752 Query 78661 TATCCATGACAGTAGTT---GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACAT 78717 | | || ||| | |||| | |||||| || || || || || || | | Sbjct 89753 TGT---TGTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGT 89809 Query 78718 AGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAG 78777 | | | | || |||| |||| | | || | || | || | ||||||| ||| | Sbjct 89810 ATTCATACAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGG 89869 Query 78778 ATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 | ||||| |||||||| || | ||| |||||||| || || Sbjct 89870 AAACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGGTG 89909 >seq28 Length=541666 Score = 147 bits (162), Expect = 3e-30 Identities = 555/857 (65%), Gaps = 18/857 (2%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || ||||| || || ||||| || |||| || || || Sbjct 325623 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 325564 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || ||||||||||| | || || | ||||| || | || | Sbjct 325563 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 325504 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028 ||||| || |||||||| || | ||| ||||| || ||||| || | |||| Sbjct 325503 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 325444 Query 48029 TTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTA 48087 | | || ||||| || || ||| | || || |||||| |||||| || || | Sbjct 325443 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 325386 Query 48088 TCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 || | || |||||||||| | | || ||||| ||| | || || |||| Sbjct 325385 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 325326 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 | ||| || | || || ||||| | ||| | || || || || || | ||| |||| Sbjct 325325 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 325266 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTT 48267 | || || | || || | ||| || || | || |||||||| |||||||| || || | Sbjct 325265 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 325206 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACC 48324 | || || || || || | | || || | || |||| | ||||| | Sbjct 325205 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 325146 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||||| |||||||| |||||| | ||| || || || || || ||||| || || Sbjct 325145 TCATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 325087 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGG 48441 || | || || |||||| | ||||||||| || | || || || | |||| Sbjct 325086 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGG 325029 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 ||||||| || || || ||||| || |||||||| ||| | ||||| | | || | Sbjct 325028 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 324969 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 |||| | || || ||| |||| || ||||| || || || ||| |||||||| | Sbjct 324968 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 324909 Query 48562 ATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCA 48617 | || | || | | | || || ||||||| || ||| | |||||||||||| Sbjct 324908 AGGCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCA 324850 Query 48618 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677 | | ||| || | |||| ||| ||||| |||||||| || || || || | || Sbjct 324849 TGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTG 324790 Query 48678 TACATATTCCATATATC 48694 ||||| | ||| ||||| Sbjct 324789 TACATTTGCCAGATATC 324773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667236995200