Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq40 336 3e-87
seq35 158 1e-33
>seq40
Length=245285
Score = 336 bits (372), Expect = 3e-87
Identities = 1320/2073 (64%), Gaps = 37/2073 (2%)
Strand=Plus/Plus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 61964 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 62023
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 62024 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 62083
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 62084 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 62143
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 62144 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 62203
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
|| || | ||| | ||| |||||||| || ||| || || ||| || |
Sbjct 62204 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 62263
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 62264 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 62323
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 62324 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 62383
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 62384 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 62443
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 62444 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 62503
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
| ||| | ||| || | | || || ||| | |
Sbjct 62504 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 62563
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 62564 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 62623
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 62624 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 62683
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 62684 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 62743
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
| || | ||||||||||| || ||| |||| | || |||||| | || | ||| |
Sbjct 62744 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 62803
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT--------CAAATTGTC-CAT 53684
|| |||||| | || | ||| || ||| | || || |||
Sbjct 62804 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 62863
Query 53685 CTATTACAAACATG--TTCAAT-GCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| || ||| | | | || |||||||| |||| ||||| || || ||| | |
Sbjct 62864 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 62923
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 62924 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 62983
Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861
|| ||| | ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct 62984 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 63043
Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921
| || | || | || || | ||| | | || || || | ||||| | |
Sbjct 63044 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 63099
Query 53922 T----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977
||| |||||||| | |||||| ||||| || ||||| | || | | |
Sbjct 63100 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 63159
Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037
| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 63160 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 63219
Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097
|| || |||||||| ||||| | ||| |||| ||||| | ||| ||||| ||
Sbjct 63220 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 63279
Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 63280 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 63339
Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217
| | | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 63340 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 63399
Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277
| || |||| |||||||||||||||||| || | ||| || || || | || ||| |
Sbjct 63400 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 63459
Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337
|| |||||||||||||| ||| | ||| || || || || |||| ||||||||
Sbjct 63460 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 63519
Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 63520 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 63579
Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 63580 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 63639
Query 54458 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
|| || | || ||| |||| || || || || ||| || | || ||
Sbjct 63640 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 63695
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 63696 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 63755
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
|| ||| |||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 63756 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 63815
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 63816 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 63872
Query 54694 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750
| | | ||| |||| | ||||| ||||| || || || || |||| || | | |
Sbjct 63873 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 63932
Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810
|| || || | || | | || | || | || | |||||||| ||| || || ||
Sbjct 63933 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 63992
Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| || || | |||||||||||| || ||
Sbjct 63993 AATTCTTGCTGCCAAAATGGCATAATCGGGGTG 64025
>seq35
Length=383322
Score = 158 bits (174), Expect = 1e-33
Identities = 561/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| || |||||||| | || || || | |||| |||| | |
Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022
| ||| || || || ||||| | ||| ||||| || ||||| || | ||||
Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213
Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 167212 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 167155
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 167154 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 167095
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 167094 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 167035
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 167034 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 166975
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 24317
| || || || ||||||| | | ||| | | || | || ||| ||||| |
Sbjct 166974 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 166915
Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 166914 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 166856
Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 24435
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 166855 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 166798
Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495
| |||||||| || || || || || ||||| || ||| | || |||| || || |
Sbjct 166797 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 166738
Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555
| || || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 166737 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 166678
Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 24612
| || | || || || ||||||| | | || | | |||||||| ||||
Sbjct 166677 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 166618
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 166617 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 166558
Query 24673 ACATATTCCAGATGTCATGATA 24694
|||| | |||||| || || ||
Sbjct 166557 ACATTTGCCAGATATCGTGGTA 166536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720338341600
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