Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 8e-23
seq19 118 9e-22
seq43 98.7 9e-16
>seq4
Length=489032
Score = 122 bits (134), Expect = 8e-23
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
||| | || |||||||||||||||||||| || || || || || |||||| | || ||
Sbjct 410052 GAAGCCAAAATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTG 409993
Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303
|| | ||||||| | | || | ||||| | || ||||||||| || | ||
Sbjct 409992 GAGTCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCT 409933
Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363
|| ||||| |||||||| || || ||||| || || ||||| || || ||| ||
Sbjct 409932 CCTGACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCT 409873
Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || ||||| ||||| || || ||| | || |||| |||||| |||| || |||
Sbjct 409872 GACTACAACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 409816
>seq19
Length=213724
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || || || || ||||| | || || || | ||
Sbjct 213612 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213553
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | |||||| | || ||||||||||| | || || ||||||
Sbjct 213552 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 213493
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||| | || |||||||| || || |||||||| || ||| | ||||| ||
Sbjct 213492 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 213433
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||||| ||||| |||||||| ||||| | ||||| || || |||
Sbjct 213432 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGAGGTGGT 213385
>seq43
Length=273409
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||| ||||| |||||||| ||||| | || || || || || ||| | || || ||
Sbjct 80237 CAAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGT 80296
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||||| |||| | ||||| | || ||||||||||| | || || |
Sbjct 80297 CCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTG 80356
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||| || ||| | || || ||||| || || |||||||| || ||| || || |
Sbjct 80357 ACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACT 80416
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| || || || || ||| | || ||||| || ||| |||| || ||||
Sbjct 80417 ACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTA 80470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765452746400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |