Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq40 311 1e-79 seq35 170 2e-37 >seq40 Length=245285 Score = 311 bits (344), Expect = 1e-79 Identities = 1211/1903 (64%), Gaps = 45/1903 (2%) Strand=Plus/Plus Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 61964 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 62023 Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 62024 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 62083 Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 62084 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 62143 Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 62144 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 62203 Query 62275 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 || || | ||| | ||| ||||| || || ||| || || ||| || | Sbjct 62204 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 62263 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391 | | ||| | ||| | || || | | | | | | || ||||| | || Sbjct 62264 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 62323 Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451 | |||||||||| ||||| | || | ||| || || || || ||||| | ||| Sbjct 62324 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 62383 Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 62384 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 62443 Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571 |||| | ||| | || || |||| || |||||| | ||| || || || | Sbjct 62444 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 62503 Query 62572 G-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCT 62624 | | | ||| |||||| | ||| || | | || || ||| Sbjct 62504 GCTTCTTGTCCCACAAGTC-------ATATTGCAAAATGCCCTGAGATGCTGGAGAACCT 62556 Query 62625 ACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCG 62684 | || || || | |||||| | | |||| || || || || || | Sbjct 62557 TGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCA 62616 Query 62685 TAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGA 62744 | || || |||||||| |||| |||| || | || ||||| || |||||| ||| Sbjct 62617 TGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA 62676 Query 62745 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804 | || ||||| || || ||||| ||||||||||| | | | |||||||||| Sbjct 62677 ATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTA 62736 Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864 | | |||| || | ||||||||||| || ||| |||| | || |||||| | || Sbjct 62737 CGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTC 62796 Query 62865 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----- 62919 | || | || |||||| | || | ||| || ||| | | | | Sbjct 62797 AAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGA 62856 Query 62920 ----CATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACACACGGCTACC 62972 |||| || ||| | | | || |||| ||| |||| ||||| || || | Sbjct 62857 GTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTC 62916 Query 62973 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 63032 || | | | |||| | || ||| |||||| ||| | || || || Sbjct 62917 TCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCC 62976 Query 63033 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63092 || || | || ||| | ||||||||||| ||||||||||| || ||||||||||||||| Sbjct 62977 AAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCA 63036 Query 63093 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63152 ||||| | || | || | || || | ||| | | | || || || | |||| Sbjct 63037 GTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTG 63092 Query 63153 TATCTC----CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63208 | | | | ||| |||||||| |||||| || || || ||||| | || Sbjct 63093 TCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGAC 63152 Query 63209 ATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63268 | | | | | |||| |||| ||| | | || | ||| || || | | | || Sbjct 63153 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 63212 Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328 || |||||| || |||||||| ||||| | ||| |||| ||||| | ||| || Sbjct 63213 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 63272 Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388 ||| || || ||||| || ||| | ||| || | || || | |||||| || || Sbjct 63273 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 63332 Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448 |||||| | || | | ||||| |||||||| || || || || | || | ||| || Sbjct 63333 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 63392 Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508 ||| || | || |||| ||||||||||||||| || || |||| || ||||| | || Sbjct 63393 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 63452 Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568 ||| ||| |||||||||||||| ||| | ||| ||||| || || |||| || Sbjct 63453 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 63512 Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628 |||||| || ||| || || || || || |||||||| || ||||| |||| Sbjct 63513 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 63572 Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688 || || ||||| |||||||| | ||| || || || ||||| | |||||||| Sbjct 63573 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 63632 Query 63689 AGCGTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63744 || || || || | || ||| |||| || || || |||||| || | | Sbjct 63633 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 63688 Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804 | || |||||| || | || |||||||| | || ||| ||||| | ||| ||| Sbjct 63689 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 63748 Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864 || || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| | Sbjct 63749 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 63808 Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907 | |||||||| ||||| | |||| | || || |||| ||| Sbjct 63809 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 63851 >seq35 Length=383322 Score = 170 bits (188), Expect = 2e-37 Identities = 574/882 (65%), Gaps = 14/882 (2%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| ||||| |||||| | || ||||| | ||||| |||| | | Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||| || || ||||| || | ||| ||||| || ||||| || | | Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || |||||||| | || ||| | | || ||| || || || | ||| ||||| Sbjct 167212 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 167154 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | |||| |||| ||||| | | || |||||| ||| | ||| || || || Sbjct 167153 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 167094 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 || ||| | ||||||||||| | ||| | || || || || || | || ||||| Sbjct 167093 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 167034 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || || | ||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 167033 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 166974 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-CT 33765 || ||||| ||||||| | | || | | || | || ||| ||||| || Sbjct 166973 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 166914 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 166913 CATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 166855 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGA 33883 | | || || |||||| | |||||||| |||| || || || | || || Sbjct 166854 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGGA 166797 Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943 |||||||| || || ||||| || ||||| || ||| | || |||| || || || Sbjct 166796 GTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAAC 166737 Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 || | || || ||| | || |||||||| || || || ||| ||| ||||| || Sbjct 166736 CTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAA 166677 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCATT 34060 || | || || || ||||||| | | || | | |||||||| |||| Sbjct 166676 GGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 166617 Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 | ||| ||| | || | ||| || | |||||||| || || || |||| || || Sbjct 166616 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 166557 Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||| | |||||| || || || | | ||||| | ||||| Sbjct 166556 CATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 166515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816261637600