Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq35 109 4e-19 >seq35 Length=383322 Score = 109 bits (120), Expect = 4e-19 Identities = 276/417 (66%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| || |||||||| || || | ||||| || || ||||| | || |||||| || Sbjct 166959 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGGTTG 167018 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| | ||||||||||| ||| | || ||||| ||| | ||| || | ||||| Sbjct 167019 AAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAG 167078 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA---ACCGTGT 22926 || ||||| |||||||||||| |||| ||| || | |||||| | | || Sbjct 167079 GGATTACACACTGACTTTGCTTGCTTGCTATTTTCTCATTT---AAACAATAGAGCCAGT 167135 Query 22927 CAGGA---CGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTC 22983 |||| || || | | || || | || || || || || || | | |||| Sbjct 167136 GAGGAAATCGTTG---AAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC 167192 Query 22984 CAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATA 23043 ||| || || || |||| || ||||| | | ||| | | ||| | Sbjct 167193 ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGTT 167252 Query 23044 CAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC 23103 |||| ||||| || | || || | || ||||| | |||| |||| ||||| | Sbjct 167253 GAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAAC 167312 Query 23104 AATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 ||||||||||| |||||||| |||||| | | |||||||| |||||||| ||| Sbjct 167313 AATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAA 167369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232861928510