Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq66 91.5 1e-13 seq19 91.5 1e-13 >seq66 Length=97371 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48509 AACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGC 48568 || |||| || || || || ||| |||||||| ||||||||||||| | || Sbjct 97281 AATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTA 97222 Query 48569 TCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCC 48628 |||| ||||| |||||||| | |||||||||| ||||| || || | || |||| Sbjct 97221 CCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCC 97162 Query 48629 TTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 || || ||| || |||| | | || || || | |||||| ||| | || Sbjct 97161 TTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTG 97102 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || || ||||| |||||||||||||| Sbjct 97101 ATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 97064 >seq19 Length=213724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 ||||| || || ||||| ||| ||||||||||| |||||||||| | || || Sbjct 213398 CTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCG 213457 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| |||||||| || | || ||||| ||||| || || | || ||||||| Sbjct 213458 TCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTG 213517 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 || ||| || |||| | || ||||| | ||||| ||| | || || Sbjct 213518 TCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATA 213577 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || ||||| || || ||||||||||| Sbjct 213578 GTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250327220170