Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq40 167 6e-36
>seq40
Length=245285
Score = 167 bits (184), Expect = 6e-36
Identities = 771/1203 (64%), Gaps = 34/1203 (3%)
Strand=Plus/Minus
Query 363380 AGTATGA-TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGG 363437
||||| | || ||| |||| ||||| |||| | ||| ||||| ||| | || |||||
Sbjct 63811 AGTATAACTACTTT-GGATTCAAGACCTTGGAAAGATCTTACCT-TCTGAGAATTAATGG 63754
Query 363438 TGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497
| || ||| ||||| || || || || | |||||||||||||| || || ||| |
Sbjct 63753 TAATGTTGCAGAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGA 63694
Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACG 363556
|| ||| | |||||||| ||||| || | ||| | ||| ||||| || |
Sbjct 63693 TGACATTGCAAGAGTTATTGAAACTTATAACTTTATGAGT-CAGAAGTATTTCACTCATG 63635
Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT- 363615
|| | || || ||| || ||||| || | | | ||||| ||||| || || ||||||
Sbjct 63634 CCTCTCCTACTCTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTA 63576
Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675
| ||| ||| || || || || || || | || || | ||| | |||||| |
Sbjct 63575 GTTGCCATGCGGGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTA 63516
Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAG 363734
|| ||||| | ||| || ||||||||| | || || ||| |||||| ||||| |
Sbjct 63515 ATCTCCAAAACTGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGA-TC 63457
Query 363735 TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793
|||||| || || || ||| |||||||| | |||| ||| | | || ||
Sbjct 63456 CTACATTGCTGGTACTAACGG-TACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCA 63398
Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853
|||| ||||| | || || ||||| ||||| || || || || |||||| |||
Sbjct 63397 ACAACACTGCTCGTTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGT 63338
Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913
| | ||||| |||||||| || |||| || |||| | || || ||| || |
Sbjct 63337 ACTTGGAGCCATGGCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTA 63278
Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973
||||||| | | || | || | ||| || | ||| | |||| | || ||||
Sbjct 63277 AAGAGGAGATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGA 63218
Query 363974 AGCGCGTGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032
| | || || ||| | ||||| | || || | ||| ||| ||| || |||
Sbjct 63217 AAAGAGTAGA-ACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTT 63159
Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092
|||| || | || || || | || | | ||||||| || ||| | |||| |
Sbjct 63158 GCCGACGTCTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAA----AAGGAAGG 63103
Query 364093 GCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGAT 364148
| | |||||| || || || ||||| |||| |||||| | || | || |
Sbjct 63102 TCGTGGAAGACAAACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAAC 63043
Query 364149 TGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208
|| || || || || | ||| |||| || ||| | || ||| || | |||||| |
Sbjct 63042 AGAAACTGGTACTCCATTCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAA 62983
Query 364209 GCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268
| || | ||| ||| | ||||| || || ||| |||||||| | | ||
Sbjct 62982 GAACTTGGGTGTCATTAAATCCTCTAACCTTTGCTGTGAAATTGTTGAATACTCTTCCCC 62923
Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGA 364325
|| |||||||| || |||||| | || || || || ||||| || ||||| || ||
Sbjct 62922 GGAAGAGACTGCTGTCTGTAACTTGGCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGA 62863
Query 364326 TGGTACT------TTTGACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376
|| |||| | || || | | || |||| | ||| | | |||| |
Sbjct 62862 TGATACTCACTGCTGGTACAACTTTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCG 62803
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
|| | ||| ||||||||| |||| ||| || |||| ||||| | | || ||
Sbjct 62802 TAACTTGAACAGAATTATCGACAGAAATTTTTACCCCGTTCCAGAAGCTAGGAGATCGAA 62743
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
||||||| || | || || | | | ||||| || || | ||||| | |||||||| | |
Sbjct 62742 TATGCGTAATAGACCTATAGCTGTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTT 62683
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| || | |||||||| || || || || |||| |||| |||||||| ||
Sbjct 62682 GAGAATTCCTTTTGATTCTCCAGAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTAT 62623
Query 364557 GTA 364559
||
Sbjct 62622 CTA 62620
Score = 84.2 bits (92), Expect = 6e-11
Identities = 224/337 (66%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812
|| |||||||| ||||| ||| | || || || || |||||||||| |||||||| |
Sbjct 62426 CCTATGCCCACTGCTTCAACTTCCCAAATTCTGGGTTACAACGAGTGTTTCGAACCTTAC 62367
Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872
|| ||| | || |||||||| || | | |||||||||| | |||||| |||
Sbjct 62366 ACTTCCAACATCTACTCACGCCGTGTATTAGCTGGAGAATTTCAAATTGTTAATCCTTAC 62307
Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932
|| | ||||| || || || |||| || | |||||| || |||||||
Sbjct 62306 TTATTGCGTGATCTAGTGGATTTGGGTCTTTGGGACGATAACATGAAAAATCATATCATT 62247
Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA--GCCTATTT 364990
| | || || ||| | || || | || | || || | || || |||| ||
Sbjct 62246 TCAGACAACGGCTCTATTCAAAATTTGCCCAACATACCTGAGCAACTTAAAGGCCT--TT 62189
Query 364991 ACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049
|||| || || ||||| ||||| || || || | ||||||||||| |||||| |
Sbjct 62188 ACAAGACTGTTTGGGAGATTTCTCAAAAGA-CTATTATTGATATGGCTGCCGATAGATCA 62130
Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086
|| | |||| ||| |||||||| ||| |||||
Sbjct 62129 GCCTATATCGATCAATCTCAGTCGTTGAAC--ATTCA 62095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350761132940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |