Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq40 358 8e-94
seq35 167 3e-36
>seq40
Length=245285
Score = 358 bits (396), Expect = 8e-94
Identities = 1365/2142 (64%), Gaps = 37/2142 (2%)
Strand=Plus/Plus
Query 61839 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 61964 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 62023
Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 62024 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 62083
Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 62084 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 62143
Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62078
|||| | ||||| |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 62144 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 62203
Query 62079 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135
|| || | ||| | ||| ||||| || || |||| || || ||| || |
Sbjct 62204 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 62263
Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 62264 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 62323
Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 62324 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 62383
Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 62384 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 62443
Query 62316 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62375
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 62444 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 62503
Query 62376 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62435
| ||| | ||| || | | || || ||| | |
Sbjct 62504 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 62563
Query 62436 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62495
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 62564 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 62623
Query 62496 TGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTA 62555
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 62624 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 62683
Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 62684 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 62743
Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675
| || | ||||||||||| || ||| |||| | || |||||| | || | || |
Sbjct 62744 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 62803
Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62726
|| |||||| | || | ||| || ||| | | | | |||
Sbjct 62804 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 62863
Query 62727 CTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62783
| || ||| | | | || |||| ||| |||| ||||| || || ||| | |
Sbjct 62864 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 62923
Query 62784 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 62924 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 62983
Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903
|| ||| | ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct 62984 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 63043
Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 62963
| || | || | || || | ||| | | | || || || | ||||| | |
Sbjct 63044 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 63099
Query 62964 T----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63019
||| |||||||| | |||||| || || || ||||| | || | | |
Sbjct 63100 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 63159
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 63160 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 63219
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || |||||||| ||||| | ||| |||| ||||| | ||| ||||| ||
Sbjct 63220 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 63279
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 63280 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 63339
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
| || | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 63340 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 63399
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || |||| |||||||||||||||||| || ||||| || || || | || ||| |
Sbjct 63400 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 63459
Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
|| |||||||||||||| ||| | ||| ||||| || || |||| ||||||||
Sbjct 63460 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 63519
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 63520 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 63579
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
||||| |||||||| | || || || || ||||| | |||||||| || |||
Sbjct 63580 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 63639
Query 63500 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555
|| || | || ||| |||| || || || |||||| || | || ||
Sbjct 63640 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 63695
Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 63696 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 63755
Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63675
|| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 63756 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 63815
Query 63676 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 63735
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 63816 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 63872
Query 63736 GGTAAT-ACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792
| | | ||| |||| | |||| | ||||| || || || || |||| || | |
Sbjct 63873 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 63932
Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852
|| || | | || | | || | || | || | |||||||| ||| || || ||
Sbjct 63933 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 63992
Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 63912
||||| || || | |||||||||||| || || || || | ||| || | ||
Sbjct 63993 AATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTC 64052
Query 63913 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954
|| || || |||||| || || || |||||||| | |||
Sbjct 64053 AGCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 64094
>seq35
Length=383322
Score = 167 bits (184), Expect = 3e-36
Identities = 563/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Minus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489
|||||||| || ||||||||| | || || || | ||||| |||| | |
Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273
Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 32548
| ||| || || || || || | ||| ||||| || ||||| || | ||||
Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213
Query 32549 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 167212 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 167155
Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 32667
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 167154 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 167095
Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 167094 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 167035
Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 167034 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 166975
Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 32843
| || || || ||||||| | | || | | || | || ||| ||||| |
Sbjct 166974 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 166915
Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 166914 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 166856
Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 32961
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 166855 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 166798
Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021
| |||||||| || || || || || ||||| |||||| | || |||| || || |
Sbjct 166797 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 166738
Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33081
| || | || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 166737 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 166678
Query 33082 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 33138
| || | || || || ||||||| | | || | | |||||||| ||||
Sbjct 166677 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 166618
Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33198
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 166617 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 166558
Query 33199 ACATATTCCAGATGTCATGATA 33220
|||| | |||||| || || ||
Sbjct 166557 ACATTTGCCAGATATCGTGGTA 166536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630653532000
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