Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq40 172 7e-38
seq35 134 2e-26
>seq40
Length=245285
Score = 172 bits (190), Expect = 7e-38
Identities = 939/1474 (64%), Gaps = 53/1474 (4%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 62353 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 62412
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| ||||| | || | ||| | | ||| ||| |
Sbjct 62413 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 62472
Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
||||| | ||||| || | | | || | || | ||||||| ||| | || |
Sbjct 62473 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 62530
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 62531 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 62590
Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 62591 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 62650
Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260
||||| || |||||||| | | | || ||||| |||| || | |||||
Sbjct 62651 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 62710
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 116319
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 62711 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 62769
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 62770 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 62829
Query 116380 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 116433
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 62830 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 62889
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 62890 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 62946
Query 116494 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 62947 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 63006
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|||||||| || ||||| |||| || || || || ||||| | || || || || | |
Sbjct 63007 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 63066
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 116666
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 63067 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 63122
Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGAC 116725
||| | ||||||| || || || | || | || | || || || || | | ||||
Sbjct 63123 GTACAATTCCTCAAATTCATCTCC-ATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAG 63181
Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785
|||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 63182 AGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACA 63241
Query 116786 GCGCCGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| | ||| | || | | | || || || | | || || || ||| | ||
Sbjct 63242 AAGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCA 63300
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904
| ||| | | ||| || || ||||| || |||| ||||| || | || || ||
Sbjct 63301 ATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG---GA 63357
Query 116905 CG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
|| |||| | |||| ||||| | || || ||| || || | | |||||||
Sbjct 63358 CGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGA 63417
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017
|| ||||||| || || || || || ||| || | ||| ||| | | ||
Sbjct 63418 ATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT-GGCACGAATATT 63476
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
|| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 63477 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 63536
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 63537 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 63596
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
||| || ||||||||||| || || || || | || || |||| |||| || ||
Sbjct 63597 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATAC-TTCTGA 63654
Query 117198 CATCTTATCGT---AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
| || || || | || || | || | |||||| || || ||||| ||||| |
Sbjct 63655 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 63713
Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGG 117312
|| ||||||| || || ||| || ||| || || |||||| | ||| | |||
Sbjct 63714 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGG 63771
Query 117313 TAAC-TCTTCTCCAAGGTCTTGAGACCAAAATAG 117345
||| |||| ||||||||||||| ||||| |||
Sbjct 63772 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAG 63804
>seq35
Length=383322
Score = 134 bits (148), Expect = 2e-26
Identities = 388/587 (66%), Gaps = 25/587 (4%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 167099 AGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 167040
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 167039 TGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGAT 166980
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC-- 127695
||||| ||| ||||| |||| | ||| || || || | | | || |||
Sbjct 166979 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAG 166924
Query 127696 -AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753
|| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || |
Sbjct 166923 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 166864
Query 127754 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 127811
| | | || ||| | ||| ||||||||||||||| |||| || || || |
Sbjct 166863 TGAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGT 166807
Query 127812 ATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870
| || ||| ||| | | | ||| || | ||| | |||| || | ||||||
Sbjct 166806 AAGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCG 166748
Query 127871 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 127930
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 166747 GGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAG 166688
Query 127931 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 166687 GCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGA 166631
Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044
| |||||||| | | |||||| || |||| ||||| ||||||||| | |
Sbjct 166630 TTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCT 166571
Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
| |||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 166570 TCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 166524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505896297200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |