Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq19 179 8e-40 seq43 161 2e-34 seq40 100 6e-16 >seq19 Length=213724 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| || || | |||||||||||| || ||||||||||||||||| | |||||| Sbjct 213391 TCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGT 213450 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| |||||||| | ||||| ||||| |||||||| || Sbjct 213451 TCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACC 213510 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||||| ||||| || || || || || ||||| Sbjct 213511 TTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAG 213570 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | ||||| Sbjct 213571 AGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213612 >seq43 Length=273409 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| ||| ||||| | ||| ||||| || || || ||||| || | ||||| Sbjct 80463 TCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGT 80404 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | ||||||||||| |||||||| || Sbjct 80403 TCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCC 80344 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||| || || |||||||| || || ||||| | Sbjct 80343 TTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAA 80284 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATG 195145 ||||| ||||| || || || || || ||||| | ||||||| || Sbjct 80283 GGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTG 80237 >seq40 Length=245285 Score = 100 bits (110), Expect = 6e-16 Identities = 203/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 160570 GATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT 160629 ||| ||||| ||||| | ||| ||| | |||| | ||||| |||||||| ||||| Sbjct 63270 GATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGT 63211 Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689 || | ||||| ||||||| ||| |||| ||| | |||||| ||||| |||| || || Sbjct 63210 AGAACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGT 63151 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 ||||| || || ||| | || |||||||||||||| || || | | | | | Sbjct 63150 CTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACA 63091 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809 | | || |||||| | || ||| | |||||||| || ||| || |||| Sbjct 63090 AACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTAC 63031 Query 160810 GCCCTTTATCGCATACAAGGATGCCATCTGTCGC---AAGAGTAACCAGAAGAACTTTGG 160866 || || || || |||||||| ||| | || | ||||||||||||||| || Sbjct 63030 TCCATTCATGCTGTATAAGGATGC---TTGTAACAAAAAAACTAACCAGAAGAACTTGGG 62974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479183410390