Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq40 246 4e-60 seq35 96.9 4e-15 >seq40 Length=245285 Score = 246 bits (272), Expect = 4e-60 Identities = 800/1229 (65%), Gaps = 29/1229 (2%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 || || | ||||| || || |||||||| || || || ||||||| || | || | Sbjct 63730 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 63671 Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337 | || || ||| || | |||| |||| ||| || | || || || || || ||| Sbjct 63670 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 63612 Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397 ||||| || || || ||||| || ||| | | |||| ||| |||||||| Sbjct 63611 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 63552 Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457 | || || || | ||| | | ||| ||||| |||||| || ||||| || ||| Sbjct 63551 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 63492 Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517 || ||||||| ||| || | | |||| ||| ||| || || || ||| Sbjct 63491 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 63432 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || ||||||||||||||||| | | || || ||| ||| || || ||||| | ||| Sbjct 63431 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 63372 Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 | | || | | | ||| ||| || | |||||||| |||||||||||||| || Sbjct 63371 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 63313 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692 | | | ||| |||| | || ||||| ||| | || ||| || | | |||||| Sbjct 63312 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 63254 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 | || | | ||||||| || || || |||||||| | || || || ||| | | Sbjct 63253 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 63194 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || | || |||| |||| | || || || || |||||| || || || |||| Sbjct 63193 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 63134 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868 | | | ||| || || ||| |||| ||| | || ||| || | |||| Sbjct 63133 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 63078 Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928 | ||||| | || || || | |||| || || ||||| || |||| ||||| Sbjct 63077 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 63018 Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988 || ||||||||||||||||| || | |||||| ||||| ||||| || || ||| Sbjct 63017 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 62958 Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048 || |||||| |||||| | || ||| | ||| ||||| ||||| || || ||| Sbjct 62957 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 62898 Query 76049 GCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCACTTTTGAT-----T 76100 || || || || |||||| | ||| | || || |||| ||| || | | Sbjct 62897 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTC--ACTGCTGGTACAACT 62840 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 |||||| || ||||||||||| || | ||||| || | ||| || | || |||| Sbjct 62839 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 62780 Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 |||||||||| |||||| ||| || | | || |||||||| | |||||||| | | Sbjct 62779 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 62721 Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279 |||||||||||||| | || |||| ||||| || | | |||||||| Sbjct 62720 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 62661 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 |||||||| || | ||| || || |||||||| || || || ||| | |||| || Sbjct 62660 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 62601 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 ||||| || | | |||| |||| || || || | |||||||| || || Sbjct 62600 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 62541 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428 || || | | || | ||| ||||||| Sbjct 62540 CAGGGCATTTTGCAATATGACTTGTGGGA 62512 >seq35 Length=383322 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052 |||||| | || | |||||||| | | ||||| | ||||| |||| |||| || Sbjct 166866 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 166925 Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111 || || | | | | ||||| || || | |||| || || ||| |||||||| Sbjct 166926 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 166981 Query 65112 CTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170 |||||| || || || || ||| |||| | |||||||||||| | ||||||||||||| Sbjct 166982 CTTCTTTTCAGGATC-TTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 167040 Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | | |||||| ||||| ||||||| | |||| ||||| | ||| || ||||| Sbjct 167041 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 167098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568332289600