Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq40 246 4e-60
seq35 96.9 4e-15
>seq40
Length=245285
Score = 246 bits (272), Expect = 4e-60
Identities = 800/1229 (65%), Gaps = 29/1229 (2%)
Strand=Plus/Minus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
|| || | ||||| || || |||||||| || || || ||||||| || | || |
Sbjct 63730 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 63671
Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 63670 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 63612
Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397
||||| || || || ||||| || ||| | | |||| ||| ||||||||
Sbjct 63611 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 63552
Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 63551 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 63492
Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 63491 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 63432
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 63431 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 63372
Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633
| | || | | | ||| ||| || | |||||||| |||||||||||||| ||
Sbjct 63371 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 63313
Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692
| | | ||| |||| | || ||||| ||| | || ||| || | | ||||||
Sbjct 63312 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 63254
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
| || | | ||||||| || || || |||||||| | || || || ||| | |
Sbjct 63253 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 63194
Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812
|| | || |||| |||| | || || || || |||||| || || || ||||
Sbjct 63193 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 63134
Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868
| | | ||| || || ||| |||| ||| | || ||| || | ||||
Sbjct 63133 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 63078
Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928
| ||||| | || || || | |||| || || ||||| || |||| |||||
Sbjct 63077 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 63018
Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988
|| ||||||||||||||||| || | |||||| ||||| ||||| || || |||
Sbjct 63017 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 62958
Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048
|| |||||| |||||| | || ||| | ||| ||||| ||||| || || |||
Sbjct 62957 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 62898
Query 76049 GCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCACTTTTGAT-----T 76100
|| || || || |||||| | ||| | || || |||| ||| || | |
Sbjct 62897 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTC--ACTGCTGGTACAACT 62840
Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160
|||||| || ||||||||||| || | ||||| || | ||| || | || ||||
Sbjct 62839 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 62780
Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219
|||||||||| |||||| ||| || | | || |||||||| | |||||||| | |
Sbjct 62779 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 62721
Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279
|||||||||||||| | || |||| ||||| || | | ||||||||
Sbjct 62720 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 62661
Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339
|||||||| || | ||| || || |||||||| || || || ||| | |||| ||
Sbjct 62660 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 62601
Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399
||||| || | | |||| |||| || || || | |||||||| || ||
Sbjct 62600 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 62541
Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428
|| || | | || | ||| |||||||
Sbjct 62540 CAGGGCATTTTGCAATATGACTTGTGGGA 62512
>seq35
Length=383322
Score = 96.9 bits (106), Expect = 4e-15
Identities = 167/238 (70%), Gaps = 10/238 (4%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052
|||||| | || | |||||||| | | ||||| | ||||| |||| |||| ||
Sbjct 166866 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 166925
Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111
|| || | | | | ||||| || || | |||| || || ||| ||||||||
Sbjct 166926 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 166981
Query 65112 CTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170
|||||| || || || || ||| |||| | |||||||||||| | |||||||||||||
Sbjct 166982 CTTCTTTTCAGGATC-TTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 167040
Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| | |||||| ||||| ||||||| | |||| ||||| | ||| || |||||
Sbjct 167041 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 167098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568332289600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |