Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq35 149 5e-31
>seq35
Length=383322
Score = 149 bits (164), Expect = 5e-31
Identities = 391/585 (67%), Gaps = 24/585 (4%)
Strand=Plus/Plus
Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780
|| || || || |||||||||||||| | || | || || |||||||| || || |||
Sbjct 166536 TACCACGATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAA 166595
Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACA 43836
| || || ||| || || ||| | |||| | | | ||| | || ||||||
Sbjct 166596 ATAGACCTGGGTAAGGATTT-GCATGACTGGAATAATCGTATGAACGATAATGAAAAATT 166654
Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896
|| || || || | || || |||||||| ||||| || ||||||||||| ||
Sbjct 166655 CTTCATCTCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTT 166714
Query 43897 GGTTAGTCGGTTT--GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954
||| | ||| | || || |||||| | || |||||| ||| ||||| || ||
Sbjct 166715 GGTG-GAAAATTTCAGTGCT-GAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTC 166772
Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014
|| || || || || ||||| || || | ||| | ||||| ||||| ||||||
Sbjct 166773 CAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATC 166832
Query 44015 AAAGATGGGCACGAGAAGCATCGATT---GTTTAATGCGATAGAAACAGTACCTGCGATT 44071
|||||| || ||| | | ||| ||| ||||| || || || | || ||
Sbjct 166833 AAAGATC--CAAAAGAGTC-TGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATC 166889
Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT------TTTGGA 44125
||| | || || ||||||||| | | |||||| ||| |||| | || |
Sbjct 166890 AAAGAAAAGGCTGACTGGGCCATGAGATGGAT---TTCTGATGACGATGCATTGTTCGCT 166946
Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185
||||| | || || || || | ||| || || || |||||||||||||| ||||| |
Sbjct 166947 GAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCT 167006
Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245
|| || ||||| ||||| ||||| | ||||| || ||||| || || |||||| | ||
Sbjct 167007 ATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATT 167066
Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290
| | || || || ||||| || |||||||||||| || ||
Sbjct 167067 TGCAGAGACGAGGGATTACACACTGACTTTGCTTGCTTGCTATTT 167111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455176520850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |