Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq40 378 1e-99 seq35 147 3e-30 >seq40 Length=245285 Score = 378 bits (418), Expect = 1e-99 Identities = 1337/2080 (64%), Gaps = 53/2080 (3%) Strand=Plus/Plus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 ||| || | |||||||||||| | || || || | || ||||| || ||||||||||| Sbjct 61965 CTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACC 62024 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||| |||| || |||| || || || ||||| || |||| ||| | | || Sbjct 62025 AGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGG 62084 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | | | ||||| |||| ||||||| ||||||||| | ||| |||||| || || Sbjct 62085 AGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGC 62144 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | Sbjct 62145 CATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTG 62204 Query 77012 ATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 || || | ||| | ||||||||| || || ||||| || || ||| || || Sbjct 62205 CTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCAT 62264 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 | ||| | ||| | | || || | | | | | | ||||||||| ||||| Sbjct 62265 GTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTG 62324 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||||||||| ||||| | || | ||| || || || || ||||| | | | || Sbjct 62325 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 62384 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||| |||| |||||| | ||| |||||||| ||||||||||| || | || || Sbjct 62385 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 62444 Query 77249 TCTGAGACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 ||| | ||| |||| | | || |||| || ||| ||| ||||| || || || | Sbjct 62445 TCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 62503 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 | ||||| | || ||||| | ||| || | | || || || | | | Sbjct 62504 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 62563 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 |||| || | ||||||| | |||| ||| |||||||| ||| | | || | Sbjct 62564 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 62623 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | ||||| ||||||| |||| || | || ||||| | |||||| ||| | | | Sbjct 62624 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTC 62682 Query 77488 AAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 || ||||| ||||| ||||| || ||||| || | | | |||||||||| | | || Sbjct 62683 AACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATA 62742 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || | |||||||||||| || ||| |||| |||| |||||| | || | || Sbjct 62743 TTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTA 62802 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACA 77666 | | ||| ||||| | || | || || ||| | | | ||| | | | Sbjct 62803 CGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGT----TGTACCAGCAGTGAGT 62858 Query 77667 AACATG---TTCAA-------------AGCTATAGATGCTAGATTACAAACTGCTACCTC 77710 | ||| ||||| ||| ||||| || | ||||| || || ||| Sbjct 62859 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTC 62918 Query 77711 ATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAG 77770 | | | | |||| | || || || || ||| |||| || |||| Sbjct 62919 TTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAA 62978 Query 77771 ATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGT 77830 || | ||||| | ||||| || || | |||||||| || || || ||||| || || Sbjct 62979 GTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGT 63038 Query 77831 TTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTA 77890 ||| | |||| || | || | | ||| | | ||||| || | ||||| Sbjct 63039 TTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTC 63094 Query 77891 T----CGCCTCTCTCTTTCATAT--TGAGTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | || | || |||| ||| | ||| | || |||||||||||||| | || Sbjct 63095 TTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGAC 63152 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 || | | ||||| |||| |||| | | || | ||| || |||| | | || Sbjct 63153 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 63212 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || |||||| || |||||||| ||||| | ||| |||| |||| | ||| || Sbjct 63213 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 63272 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 || || || ||||| || ||| | || | | || || | ||||||||| || Sbjct 63273 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 63332 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||| ||||| ||||| || || || | ||| | || || Sbjct 63333 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 63392 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || | || |||| ||||||||||||||| || || || || || || |||| ||| Sbjct 63393 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 63452 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 || ||| | || ||||||||| |||| | || ||||| || || | || || Sbjct 63453 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 63512 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 |||| ||| || ||||| |||||||| || || || || ||||||| |||| Sbjct 63513 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 63572 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 || | ||||| |||||||| | ||| || || || ||||| | || ||||| Sbjct 63573 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 63632 Query 78425 TGCATGCGTAAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTA 78480 ||||| || || | || ||| |||| || || ||||||||| || | | | Sbjct 63633 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 63688 Query 78481 TGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCG 78540 |||| |||||| || | || |||||||| | || || ||||| | ||| | Sbjct 63689 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 63748 Query 78541 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 78600 ||| ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| | Sbjct 63749 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 63808 Query 78601 ATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAA 78660 | ||||||||| ||||| | |||| |||| || || | ||| || ||| |||| Sbjct 63809 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAA 63868 Query 78661 TATCCATGACAGTAGTT---GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACAT 78717 | | || ||| | |||| | |||||| || || || || || || | | Sbjct 63869 TGT---TGTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGT 63925 Query 78718 AGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAG 78777 | | | | || |||| |||| | | || | || | || | ||||||| ||| | Sbjct 63926 ATTCATACAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGG 63985 Query 78778 ATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 | ||||| |||||||| || | ||| |||||||| || || Sbjct 63986 AAACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGGTG 64025 >seq35 Length=383322 Score = 147 bits (162), Expect = 3e-30 Identities = 555/857 (65%), Gaps = 18/857 (2%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || ||||| || || ||||| || |||| || || || Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || ||||||||||| | || || | ||||| || | || | Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028 ||||| || |||||||| || | ||| ||||| || ||||| || | |||| Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213 Query 48029 TTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTA 48087 | | || ||||| || || ||| | || || |||||| |||||| || || | Sbjct 167212 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 167155 Query 48088 TCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 || | || |||||||||| | | || ||||| ||| | || || |||| Sbjct 167154 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 167095 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 | ||| || | || || ||||| | ||| | || || || || || | ||| |||| Sbjct 167094 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 167035 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTT 48267 | || || | || || | ||| || || | || |||||||| |||||||| || || | Sbjct 167034 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 166975 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACC 48324 | || || || || || | | || || | || |||| | ||||| | Sbjct 166974 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 166915 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||||| |||||||| |||||| | ||| || || || || || ||||| || || Sbjct 166914 TCATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 166856 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGG 48441 || | || || |||||| | ||||||||| || | || || || | |||| Sbjct 166855 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGG 166798 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 ||||||| || || || ||||| || |||||||| ||| | ||||| | | || | Sbjct 166797 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 166738 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 |||| | || || ||| |||| || ||||| || || || ||| |||||||| | Sbjct 166737 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 166678 Query 48562 ATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCA 48617 | || | || | | | || || ||||||| || ||| | |||||||||||| Sbjct 166677 AGGCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCA 166619 Query 48618 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677 | | ||| || | |||| ||| ||||| |||||||| || || || || | || Sbjct 166618 TGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTG 166559 Query 48678 TACATATTCCATATATC 48694 ||||| | ||| ||||| Sbjct 166558 TACATTTGCCAGATATC 166542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667323828800