Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq40 385 7e-102 seq35 188 1e-42 >seq40 Length=245285 Score = 385 bits (426), Expect = 7e-102 Identities = 1233/1893 (65%), Gaps = 50/1893 (3%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| || |||||||||| || | || | || ||||| || |||||||||||||| | Sbjct 61970 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 62029 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| || |||| || || || ||||| || || | ||| | | ||| | Sbjct 62030 TTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGGAGCCA 62089 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | ||||| |||| ||||||| ||||||||| | ||| |||||| || ||||| | Sbjct 62090 TCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGCCATAT 62149 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | || | Sbjct 62150 CAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTGCTCAG 62209 Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | || | ||||||||| || ||| || || || || ||| || || | || Sbjct 62210 GTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 62269 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | | ||| | || || | | | | | | |||||||||||||||||||| Sbjct 62270 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGAAATT 62329 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 |||||| ||||| | || | ||| || || || || ||||| | | | || |||| Sbjct 62330 CTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGT 62389 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 |||| |||||| | |||||||||||| ||||||||||| || | || ||||| | Sbjct 62390 AACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTA 62449 Query 75849 GACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 ||| |||| | | || |||| || ||| ||| ||||| || || || || Sbjct 62450 AACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGGGCTTC 62508 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATGT 75963 ||||| | || ||||| | ||| || | |||| | || || | | || Sbjct 62509 TTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGA----GAACCTTGGAAGGT 62564 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 |||||| | || || | | |||| |||| || || || || | | || || Sbjct 62565 TTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGAT 62624 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083 ||||| ||||||| ||||||| | || ||||| || |||||||||| | | | | Sbjct 62625 AGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTCA 62683 Query 76084 AAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 | ||||| ||||| |||| || ||||| || | | | |||||||||| | | ||| Sbjct 62684 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 62743 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 | || | ||||||||||| |||||| |||| | || |||||| | || | || | Sbjct 62744 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 62803 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCAT 76253 ||| ||||| | || | || || ||| | || | | | ||| Sbjct 62804 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 62863 Query 76254 C--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 | | ||| |||| |||||| ||||| || | ||||| || || ||| | | Sbjct 62864 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 62923 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATTT 76369 | |||| | || || ||| || ||| | || || | ||||| | | Sbjct 62924 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 62983 Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 | | |||| | ||||||||||| | |||||||| || | || ||||| |||||||| Sbjct 62984 TCT-GGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 63042 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT--- 76486 | |||| || | || | | ||| | | ||||| || | ||||| | Sbjct 63043 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCC 63098 Query 76487 -CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 || |||| || |||| ||| | || || |||||||||||||| | || || Sbjct 63099 ACGACCTTC-CT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCG 63156 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 | | |||||| |||| | ||| | | || | ||| || |||| | | || | | Sbjct 63157 GCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTT 63216 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 ||||| || |||||||| ||||| | ||| |||| |||| | ||| || || Sbjct 63217 TTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCT 63276 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||||| || ||| | ||| | | || || | ||||||||| || | Sbjct 63277 TTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAG 63336 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || | || | |||| || ||||| ||||| || || || | ||| | |||||||| Sbjct 63337 TACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTG 63396 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || | || |||| |||||||||||| || || || ||||| || || |||| ||| || Sbjct 63397 TTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAG 63456 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 ||| |||||||||||| ||| | || ||||| || || |||| |||||| Sbjct 63457 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATT 63516 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 | |||||| ||||| || || || ||||| || || |||||| |||| || Sbjct 63517 AAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACT 63576 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 | ||||| |||||||| | ||| || || || ||||||| |||||||| ||| Sbjct 63577 AAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCA 63636 Query 77024 TGAGTGAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC 77079 |||||||| | || ||| |||| || || |||||||||||| | | || || Sbjct 63637 TGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTC 63692 Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 |||||| || | ||| |||||||| | || || ||||| |||||| || || Sbjct 63693 ATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATT 63752 Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199 | ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || Sbjct 63753 ACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTG 63812 Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 ||||||||| ||||| | |||| | || || || Sbjct 63813 AAAGTCTCTATCGTAGACAATAGCAGAGTTCAG 63845 >seq35 Length=383322 Score = 188 bits (208), Expect = 1e-42 Identities = 560/855 (65%), Gaps = 14/855 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||| || | || ||||| || || ||||| || |||| || || || Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| ||||| | || || || | ||||| || | || | Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| || |||||||| || | |||| ||||| || ||||| || | | Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 ||| || ||||| || || ||| | || || ||| || |||||| || | || || Sbjct 167212 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 167154 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | | || |||||||||| | | || | ||||| ||| | || || ||||| Sbjct 167153 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 167094 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||| || | || || ||||| | ||| | || || || || || | || ||||| Sbjct 167093 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 167034 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || || | ||| || | ||| || |||| || |||||||| |||||||| || || || Sbjct 167033 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 166974 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814 ||||| ||||| || || | | || || | ||||| | || | ||||| || Sbjct 166973 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 166914 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||||| || | ||| || || || || || ||||| || || || Sbjct 166913 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 166854 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAA 46932 | || | |||||| | || ||||| || | || || || | || || Sbjct 166853 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGGAG 166796 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 |||||||| || || ||||| || |||||||| ||| ||||||| | || || ||| Sbjct 166795 TGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACC 166736 Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 || | || || ||| ||| || ||||| || || || ||| |||||||| || Sbjct 166735 TCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAG 166676 Query 47053 GCCAATACATGTTTA-ATAAAATATTTTTCAT---CGGTAGTCAGTTTATTCCAGTCATT 47108 || | || | | | || || ||||||||| || | | | ||||||||||||| Sbjct 166675 GCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 166617 Query 47109 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168 | ||| || | |||| ||| ||||| ||||| || || || || || | || || Sbjct 166616 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 166557 Query 47169 CATATTCCATATATC 47183 ||| | ||| ||||| Sbjct 166556 CATTTGCCAGATATC 166542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932885014400