Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq40 385 7e-102
seq35 188 1e-42
>seq40
Length=245285
Score = 385 bits (426), Expect = 7e-102
Identities = 1233/1893 (65%), Gaps = 50/1893 (3%)
Strand=Plus/Plus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| || |||||||||| || | || | || ||||| || |||||||||||||| |
Sbjct 61970 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 62029
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
||| || |||| || || || ||||| || || | ||| | | ||| |
Sbjct 62030 TTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGGAGCCA 62089
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
| ||||| |||| ||||||| ||||||||| | ||| |||||| || ||||| |
Sbjct 62090 TCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGCCATAT 62149
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | || |
Sbjct 62150 CAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTGCTCAG 62209
Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
| | || | ||||||||| || ||| || || || || ||| || || | ||
Sbjct 62210 GTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 62269
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| | ||| | || || | | | | | | ||||||||||||||||||||
Sbjct 62270 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGAAATT 62329
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
|||||| ||||| | || | ||| || || || || ||||| | | | || ||||
Sbjct 62330 CTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGT 62389
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
|||| |||||| | |||||||||||| ||||||||||| || | || ||||| |
Sbjct 62390 AACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTA 62449
Query 75849 GACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907
||| |||| | | || |||| || ||| ||| ||||| || || || ||
Sbjct 62450 AACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGGGCTTC 62508
Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATGT 75963
||||| | || ||||| | ||| || | |||| | || || | | ||
Sbjct 62509 TTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGA----GAACCTTGGAAGGT 62564
Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023
|||||| | || || | | |||| |||| || || || || | | || ||
Sbjct 62565 TTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGAT 62624
Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083
||||| ||||||| ||||||| | || ||||| || |||||||||| | | | |
Sbjct 62625 AGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTCA 62683
Query 76084 AAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142
| ||||| ||||| |||| || ||||| || | | | |||||||||| | | |||
Sbjct 62684 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 62743
Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202
| || | ||||||||||| |||||| |||| | || |||||| | || | || |
Sbjct 62744 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 62803
Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCAT 76253
||| ||||| | || | || || ||| | || | | | |||
Sbjct 62804 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 62863
Query 76254 C--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310
| | ||| |||| |||||| ||||| || | ||||| || || ||| | |
Sbjct 62864 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 62923
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATTT 76369
| |||| | || || ||| || ||| | || || | ||||| | |
Sbjct 62924 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 62983
Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429
| | |||| | ||||||||||| | |||||||| || | || ||||| ||||||||
Sbjct 62984 TCT-GGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 63042
Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT--- 76486
| |||| || | || | | ||| | | ||||| || | ||||| |
Sbjct 63043 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCC 63098
Query 76487 -CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543
|| |||| || |||| ||| | || || |||||||||||||| | || ||
Sbjct 63099 ACGACCTTC-CT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCG 63156
Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603
| | |||||| |||| | ||| | | || | ||| || |||| | | || | |
Sbjct 63157 GCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTT 63216
Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663
||||| || |||||||| ||||| | ||| |||| |||| | ||| || ||
Sbjct 63217 TTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCT 63276
Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723
|| || ||||| || ||| | ||| | | || || | ||||||||| || |
Sbjct 63277 TTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAG 63336
Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783
|| | || | |||| || ||||| ||||| || || || | ||| | ||||||||
Sbjct 63337 TACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTG 63396
Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843
|| | || |||| |||||||||||| || || || ||||| || || |||| ||| ||
Sbjct 63397 TTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAG 63456
Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903
||| |||||||||||| ||| | || ||||| || || |||| ||||||
Sbjct 63457 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATT 63516
Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963
| |||||| ||||| || || || ||||| || || |||||| |||| ||
Sbjct 63517 AAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACT 63576
Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023
| ||||| |||||||| | ||| || || || ||||||| |||||||| |||
Sbjct 63577 AAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCA 63636
Query 77024 TGAGTGAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC 77079
|||||||| | || ||| |||| || || |||||||||||| | | || ||
Sbjct 63637 TGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTC 63692
Query 77080 CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139
|||||| || | ||| |||||||| | || || ||||| |||||| || ||
Sbjct 63693 ATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATT 63752
Query 77140 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 77199
| ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| ||
Sbjct 63753 ACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTG 63812
Query 77200 AAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
||||||||| ||||| | |||| | || || ||
Sbjct 63813 AAAGTCTCTATCGTAGACAATAGCAGAGTTCAG 63845
>seq35
Length=383322
Score = 188 bits (208), Expect = 1e-42
Identities = 560/855 (65%), Gaps = 14/855 (2%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| ||| || | || ||||| || || ||||| || |||| || || ||
Sbjct 167392 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 167333
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || ||||| ||||| | || || || | ||||| || | || |
Sbjct 167332 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 167273
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
||||| || |||||||| || | |||| ||||| || ||||| || | |
Sbjct 167272 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 167213
Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
||| || ||||| || || ||| | || || ||| || |||||| || | || ||
Sbjct 167212 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 167154
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | || |||||||||| | | || | ||||| ||| | || || |||||
Sbjct 167153 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 167094
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
||| || | || || ||||| | ||| | || || || || || | || |||||
Sbjct 167093 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 167034
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| || | ||| || | ||| || |||| || |||||||| |||||||| || || ||
Sbjct 167033 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 166974
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
||||| ||||| || || | | || || | ||||| | || | ||||| ||
Sbjct 166973 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 166914
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||||| || | ||| || || || || || ||||| || || ||
Sbjct 166913 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 166854
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAA 46932
| || | |||||| | || ||||| || | || || || | || ||
Sbjct 166853 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGGAG 166796
Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992
|||||||| || || ||||| || |||||||| ||| ||||||| | || || |||
Sbjct 166795 TGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACC 166736
Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052
|| | || || ||| ||| || ||||| || || || ||| |||||||| ||
Sbjct 166735 TCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAG 166676
Query 47053 GCCAATACATGTTTA-ATAAAATATTTTTCAT---CGGTAGTCAGTTTATTCCAGTCATT 47108
|| | || | | | || || ||||||||| || | | | |||||||||||||
Sbjct 166675 GCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 166617
Query 47109 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168
| ||| || | |||| ||| ||||| ||||| || || || || || | || ||
Sbjct 166616 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 166557
Query 47169 CATATTCCATATATC 47183
||| | ||| |||||
Sbjct 166556 CATTTGCCAGATATC 166542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932885014400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |