Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 seq43 91.5 1e-13 seq19 82.4 7e-11 >seq4 Length=489032 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| ||||| || | || | | || || | ||||| || || || Sbjct 409852 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAA 409911 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| ||||||||||| | |||| | |||||||||| ||| | || | | ||| Sbjct 409912 GATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 409970 Query 41791 CGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | || ||||||| ||||||||||||| || || || ||||| || || ||||||| Sbjct 409971 TGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTA 410030 Query 41850 CGAAAATCTGCATGTT 41865 ||||||| ||||| || Sbjct 410031 CGAAAATTTGCATTTT 410046 >seq43 Length=273409 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| |||| || ||||||||| ||||| ||||| || || || | |||| || Sbjct 80450 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 80391 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| || || || |||| || |||||||| | |||| | |||||||| || Sbjct 80390 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCT-TG 80332 Query 41774 ATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 | | || | ||| || | ||| |||||| ||||| || |||| || || || Sbjct 80331 AATCTTGGACTTGACATTGTCGATG--GTGTCGGAGGACTCGACTTCCAAGGTAATAGTC 80274 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| || | ||||| |||||||||||||| || Sbjct 80273 TTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 80239 >seq19 Length=213724 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| |||| || || ||| ||||| ||||| || || || || || || | |||| Sbjct 213400 TAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTC 213459 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || ||||| || ||||| |||| || || ||||| | |||| | |||||||| Sbjct 213460 TTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTC 213519 Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| | || | || ||| || ||| || ||||| ||||| | || || | Sbjct 213520 T-TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAG 213578 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| || || ||||| |||||||||||||| Sbjct 213579 TCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303017604000