Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 336 3e-87
seq4 158 1e-33
>seq1
Length=2891404
Score = 336 bits (372), Expect = 3e-87
Identities = 1320/2073 (64%), Gaps = 37/2073 (2%)
Strand=Plus/Plus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 1095770 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 1095829
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 1095830 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 1095889
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 1095890 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 1095949
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 1095950 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 1096009
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
|| || | ||| | ||| |||||||| || ||| || || ||| || |
Sbjct 1096010 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 1096069
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 1096070 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 1096129
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 1096130 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 1096189
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 1096190 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 1096249
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 1096250 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 1096309
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
| ||| | ||| || | | || || ||| | |
Sbjct 1096310 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 1096369
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 1096370 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 1096429
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 1096430 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 1096489
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 1096490 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 1096549
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
| || | ||||||||||| || ||| |||| | || |||||| | || | ||| |
Sbjct 1096550 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 1096609
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT--------CAAATTGTC-CAT 53684
|| |||||| | || | ||| || ||| | || || |||
Sbjct 1096610 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 1096669
Query 53685 CTATTACAAACATG--TTCAAT-GCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| || ||| | | | || |||||||| |||| ||||| || || ||| | |
Sbjct 1096670 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 1096729
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 1096730 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 1096789
Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861
|| ||| | ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct 1096790 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 1096849
Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921
| || | || | || || | ||| | | || || || | ||||| | |
Sbjct 1096850 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 1096905
Query 53922 T----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977
||| |||||||| | |||||| ||||| || ||||| | || | | |
Sbjct 1096906 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 1096965
Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037
| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 1096966 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 1097025
Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097
|| || |||||||| ||||| | ||| |||| ||||| | ||| ||||| ||
Sbjct 1097026 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 1097085
Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 1097086 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 1097145
Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217
| | | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 1097146 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 1097205
Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277
| || |||| |||||||||||||||||| || | ||| || || || | || ||| |
Sbjct 1097206 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 1097265
Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337
|| |||||||||||||| ||| | ||| || || || || |||| ||||||||
Sbjct 1097266 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 1097325
Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 1097326 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 1097385
Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 1097386 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 1097445
Query 54458 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
|| || | || ||| |||| || || || || ||| || | || ||
Sbjct 1097446 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 1097501
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 1097502 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 1097561
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
|| ||| |||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 1097562 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 1097621
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 1097622 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 1097678
Query 54694 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750
| | | ||| |||| | ||||| ||||| || || || || |||| || | | |
Sbjct 1097679 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 1097738
Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810
|| || || | || | | || | || | || | |||||||| ||| || || ||
Sbjct 1097739 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 1097798
Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| || || | |||||||||||| || ||
Sbjct 1097799 AATTCTTGCTGCCAAAATGGCATAATCGGGGTG 1097831
>seq4
Length=1814878
Score = 158 bits (174), Expect = 1e-33
Identities = 561/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 438450 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 438509
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| || |||||||| | || || || | |||| |||| | |
Sbjct 438510 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 438569
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022
| ||| || || || ||||| | ||| ||||| || ||||| || | ||||
Sbjct 438570 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 438629
Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 438630 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 438687
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 438688 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 438747
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 438748 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 438807
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 438808 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 438867
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 24317
| || || || ||||||| | | ||| | | || | || ||| ||||| |
Sbjct 438868 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 438927
Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 438928 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 438986
Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 24435
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 438987 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 439044
Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495
| |||||||| || || || || || ||||| || ||| | || |||| || || |
Sbjct 439045 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 439104
Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555
| || || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 439105 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 439164
Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 24612
| || | || || || ||||||| | | || | | |||||||| ||||
Sbjct 439165 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 439224
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 439225 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 439284
Query 24673 ACATATTCCAGATGTCATGATA 24694
|||| | |||||| || || ||
Sbjct 439285 ACATTTGCCAGATATCGTGGTA 439306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721548049360
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