Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 6e-30
>seq3
Length=2260675
Score = 145 bits (160), Expect = 6e-30
Identities = 380/576 (66%), Gaps = 19/576 (3%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| |||||||| || ||||| |||||||||||| | |||||||||||| | ||| |||
Sbjct 1940482 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 1940423
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
|| ||| | || ||||||||| | |||||| | | || ||| | ||
Sbjct 1940422 TGTAAGACAGACTACACTGGACAAGGGTTTGATCAACTTTCTAGGGTAATTGAAACTCTT 1940363
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397
|| || ||| | ||||||||||| || | | || |||||| || |||| |
Sbjct 1940362 CGTACCAATCCATATGACAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTTGAG 1940303
Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA---------AT 20448
||||||| | || || |||||| | | || || ||||| ||| || ||
Sbjct 1940302 AAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTATGTTTCTTTCCCGAAAGAT 1940243
Query 20449 AA------TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502
|| |||||| || ||| ||||||||| || ||| |||||||||| |||| |||
Sbjct 1940242 AAAAAGCCTGAATTATCTTGTTTAATGTATCAGCGCTCCTGTGATATGGGATTGGGAGTT 1940183
Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562
|||||||| | || |||||||| |||| || | ||||| ||||| || ||| |
Sbjct 1940182 CCTTTCAACGTCGCCAGTTATGCCTTGCTGACCAAAATGATAGCACACGTAGTCGATATG 1940123
Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA- 20621
| || ||||| | || ||||| || || || ||| | ||||| | ||| ||||
Sbjct 1940122 GACTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTAGACCATGTAGAT 1940063
Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCAT-TACTC 20680
|| | ||| || | | | | || |||| | |||| || || | | || || |
Sbjct 1940062 GCCCTGAAAGTTCAGGCTGAAAGGATTCCCAAGA-AATTTCCCACGTTAAGAATCAACAC 1940004
Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740
|||| |||||||| | | ||| ||| ||| || ||| | |||| |||| |||
Sbjct 1940003 GAAC-ACCAAAGATATCGATGGTTTCAAATTTGAGGACTTTCAGATAGATAATTATGATC 1939945
Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776
| ||| | || |||| ||||||| || ||||
Sbjct 1939944 CTCATCCACCCATCAAAATGAAAATGTCCGTGTAAT 1939909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183965944615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |