Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 405 7e-108 seq4 183 4e-41 >seq1 Length=2891404 Score = 405 bits (448), Expect = 7e-108 Identities = 1376/2135 (64%), Gaps = 23/2135 (1%) Strand=Plus/Plus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 1095770 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 1095829 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || |||| || |||| || || || |||||||| || | ||| | | | Sbjct 1095830 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 1095889 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 1095890 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 1095949 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 1095950 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 1096009 Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 1096010 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 1096069 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | | || | ||| | || || | | | | | | |||||||| | || Sbjct 1096070 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 1096129 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 |||||||||||| ||||| | || | ||| || || || || ||||| | | | Sbjct 1096130 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 1096189 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || | |||| |||||| | |||||| || || ||||||||||| || | || | Sbjct 1096190 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 1096249 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 |||| | ||| || || || |||| || |||||||| ||||| || ||||| | Sbjct 1096250 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 1096309 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303 | | ||| | |||||||| | ||| || | | || || ||| | | | Sbjct 1096310 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 1096369 Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363 |||| || | |||||| | |||||||||| || || || ||| | | || | Sbjct 1096370 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 1096429 Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423 | ||||| ||||||| |||| || | || |||||| | |||||| ||| | | Sbjct 1096430 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 1096489 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 1096490 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 1096549 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 1096550 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 1096609 Query 79544 TGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---------CA 79593 || || |||||| | || | || || ||| | | | | || Sbjct 1096610 -GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCA 1096668 Query 79594 TCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650 || || ||| | | | || || | ||| |||| ||||| || || ||| | Sbjct 1096669 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCC 1096728 Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710 | | |||| | |||||| ||| |||||| | |||||| || || || Sbjct 1096729 GGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTC 1096788 Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770 | || ||| | ||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct 1096789 TTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 1096848 Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCT 79829 | || | || | || || | ||| | | | || || || | | ||| | Sbjct 1096849 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGA 1096908 Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 | || || |||||||| | || ||| || || || ||||| | || ||| | | Sbjct 1096909 CCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAG 1096967 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 |||||| ||| ||| | | || | ||| || |||| | | ||||| |||||| Sbjct 1096968 GCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCAT 1097027 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 || |||||||| ||||| | ||| |||| ||||| | ||| |||||| || || Sbjct 1097028 GAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACC 1097087 Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069 ||||| || ||| | ||| || | || || | |||||| || |||||||| | Sbjct 1097088 ATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAA 1097147 Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129 || | | || || |||||||| || || || || | || | ||| ||||| || | Sbjct 1097148 AGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAA 1097207 Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189 || |||| |||||||||||||||||| || ||||| || || || | || ||| ||| Sbjct 1097208 GACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCC 1097267 Query 80190 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 80249 |||||||||||||| ||| | ||| ||||| || || |||| |||||||| || Sbjct 1097268 TGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGC 1097327 Query 80250 GCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309 ||| || || ||||| || ||||| || || ||||| |||| || || || Sbjct 1097328 ACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAA 1097387 Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369 ||| |||||||| | || || || || ||||| | |||||||| || || || Sbjct 1097388 ACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGT 1097447 Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429 || | || | | || | || || || |||||| || | | || || ||| Sbjct 1097448 GAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATG 1097507 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 ||| || | || |||||||| | || ||| ||||| | ||| | | || ||| || Sbjct 1097508 AATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAAT 1097567 Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549 | ||| | ||||||| ||||||| || || || ||||| ||||| || |||||||| Sbjct 1097568 TCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCT 1097627 Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT 80609 ||||| | |||| | ||||| || | ||| | ||| | || | | ||| Sbjct 1097628 ATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGTG-- 1097685 Query 80610 ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667 ||| |||| | ||||| ||||| || || || || || | || | | || || Sbjct 1097686 TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAACTCT 1097745 Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727 | | || | | || | || | || | ||||||| ||| || || || ||||| Sbjct 1097746 TTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATTCTT 1097805 Query 80728 GCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 80787 || || |||||||||||||| || || || || | ||| || | || || || Sbjct 1097806 GCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCAGCA 1097865 Query 80788 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || |||||| || || || ||||| || | ||| Sbjct 1097866 AGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 1097900 >seq4 Length=1814878 Score = 183 bits (202), Expect = 4e-41 Identities = 579/883 (66%), Gaps = 16/883 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 438450 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 438509 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 438510 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 438569 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 49847 | ||| || || || || || | ||| ||||| || ||||| || | |||| Sbjct 438570 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 438629 Query 49848 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 | | |||||||| | || ||| | | || ||| || || || ||||| |||| Sbjct 438630 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 438687 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | |||| |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 438688 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 438747 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || ||| | ||||||||||| | ||| || || ||||| || || | || |||| Sbjct 438748 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 438807 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || || | ||| || | ||| || || || ||||| || || ||||||||||| || | Sbjct 438808 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 438867 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTC-TCCATAACTG--GCGCTGTCATGTATCCA-C 50142 | || || || |||||||| | | || | | | || || ||| ||||| | Sbjct 438868 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 438927 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 438928 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 438986 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 50260 | | || || |||||| | |||||||| |||| || || || | || | Sbjct 438987 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 439044 Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 439045 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 439104 Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380 | || | || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 439105 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 439164 Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCAT 50437 | || | || || || |||||| | | | | || | |||||||| |||| Sbjct 439165 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 439224 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 | ||| ||| | |||| ||| || | |||||||| || || || |||| || | Sbjct 439225 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 439284 Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||| | |||||| || || || | | ||||| | ||||| Sbjct 439285 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 439327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268737151480