Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 194 4e-44
seq2 168 2e-36
seq3 156 1e-32
>seq4
Length=1814878
Score = 194 bits (214), Expect = 4e-44
Identities = 394/578 (68%), Gaps = 8/578 (1%)
Strand=Plus/Minus
Query 268730 GATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGAT 268789
||||| ||| |||||||| ||||||| ||||| |||||||||| || ||| ||||
Sbjct 439300 GATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAAATAGAC 439241
Query 268790 CTGTCTTATGACTTAATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATA 268846
||| | | || || || ||||| ||| | ||| | || |||| | || ||
Sbjct 439240 CTGGGTAAGGATTTGCATGACTGGAATAATCGTATGAACGATAATGAAAAATTCTTCATC 439181
Query 268847 TCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAG 268906
|| | ||||| || ||||| | ||| ||||| || || ||||| | || ||
Sbjct 439180 TCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGAA 439121
Query 268907 AAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCT 268966
|| ||| || ||||| || |||| ||||| | ||| |||||||| ||||||||
Sbjct 439120 AATTTCAGTGCTGAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCATG 439061
Query 268967 ATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAAC 269026
|| || || ||||| || |||| ||| | | || |||||||| || | |||
Sbjct 439060 ATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGATCCA 439001
Query 269027 AACGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTC 269085
|| || || || || | | || |||| | | | ||| | | | |||| |
Sbjct 439000 AAAGAGTCTGAATTCCTGTTCAATGCCATCGAGACCATTCCA-TGTATCAAAGAAAAGGC 438942
Query 269086 TGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGC 269142
||| ||||| ||| |||||| ||| || || || || ||| | || |||||
Sbjct 438941 TGACTGGGCCATGAGATGGATTTCTGATGACGATGCATTGTTCGCTGAACGTTTGGTTGC 438882
Query 269143 TTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAA 269202
|| || ||||| || ||||| |||||||| || |||||||| ||||||| ||||||||
Sbjct 438881 CTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGGTTGAA 438822
Query 269203 GAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGG 269262
||| ||||| || |||||||| || || ||||| || || | || |||| ||||| ||
Sbjct 438821 GAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGG 438762
Query 269263 TTTACACTGCGACTTCGCTTGTTTATTATTTACTAATT 269300
|||||| ||||| ||||| || ||||| || |||
Sbjct 438761 ATTACACACTGACTTTGCTTGCTTGCTATTTTCTCATT 438724
Score = 163 bits (180), Expect = 7e-35
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || |||| || || || | || | || ||||| || || || || || |||
Sbjct 1484695 ATACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCA 1484754
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||||||||| ||||| || ||||||||||||| | || || ||||||
Sbjct 1484755 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGA 1484814
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| |||||||| | ||| ||||| || | || || | ||
Sbjct 1484815 GGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCC 1484874
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
||||| || || ||||||||||| || || ||||| ||||| |||||||||||
Sbjct 1484875 ACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 1484927
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| || || | ||| | || | || ||||| || |||||||| || |||||
Sbjct 1483786 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 1483845
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
||||||||||||||||| ||||| || ||||| || || | | || || ||||||||
Sbjct 1483846 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 1483905
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || |||||||| | ||| || || || | ||||| | ||||||
Sbjct 1483906 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 1483965
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || |||||||||||||| || || || || || ||||||||
Sbjct 1483966 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 1484012
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || || || | || | || ||||| ||||| || || ||||||
Sbjct 1484011 ATACCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCA 1484070
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||| ||||| ||||| || |||||||| || || | || |||||||||
Sbjct 1484071 GAAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGA 1484130
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | ||||| || || | || || | ||
Sbjct 1484131 GGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCC 1484190
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||||||||| | || || ||||| ||||||||
Sbjct 1484191 ACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 1484240
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || || | || | || | |||||||| || || || || ||||||
Sbjct 1484467 ATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCA 1484526
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||| ||||| | ||| || ||||| || || | | || || ||||||
Sbjct 1484527 GAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 1484586
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | || || || || | |||||| | ||||
Sbjct 1484587 GGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCT 1484646
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || |||||||||||||| || | || || || || ||||||||
Sbjct 1484647 ACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 1484696
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || || | || | || | |||||||| || || || || ||||||
Sbjct 1484239 ATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCA 1484298
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||| ||||| | ||| || ||||| || || | | || || ||||||
Sbjct 1484299 GAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 1484358
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | ||||| || || | || || | ||
Sbjct 1484359 GGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCC 1484418
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||||||||| | || || || || ||||||||
Sbjct 1484419 ACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 1484468
>seq2
Length=2396783
Score = 168 bits (186), Expect = 2e-36
Identities = 177/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || || || || || || ||||| || ||||| || || ||||||
Sbjct 892805 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 892864
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||||||||| ||||| || ||||||||||| | | ||||| ||||||
Sbjct 892865 GACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGA 892924
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| |||||||| || || |||||||| | || ||||| || | ||| ||| | ||
Sbjct 892925 GGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCG 892984
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | |||||||||||||| || | || || || || |||||||||||
Sbjct 892985 ACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 893037
>seq3
Length=2260675
Score = 156 bits (172), Expect = 1e-32
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | ||||| || | || || ||||| || || || || || ||||||||
Sbjct 1393306 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 1393365
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||| || || | ||| || |||||||| || || | |||||| ||||||||
Sbjct 1393366 AAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGA 1393425
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
||||| || || ||||||||||| | || || || || | || ||| || || |||
Sbjct 1393426 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACC 1393485
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| | || ||||||||||| ||||| || ||||| || || |||||||||
Sbjct 1393486 TCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 1393536
Score = 89.7 bits (98), Expect = 1e-12
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTA 165157
||||||||||||||| |||||||| | | |||||||||||||| ||||||||
Sbjct 2000790 GATAAGGATGAATGGTTAACTTGGAAGGCCAGAACTGATCCTGTTTTACACATAGAGCTG 2000731
Query 165158 AGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGATA 165217
||||||||||||||||| | || | ||||| || || |||| | || || || ||
Sbjct 2000730 AGAAGATGGGCAGATATTCTAGTGGTTGCACCTTTGACCTCAAATACATTTGCCAAAATC 2000671
Query 165218 GCTAACGGTATCTGTAATAACTTGTTAAC 165246
||| || | ||| | || ||||| ||
Sbjct 2000670 GCTCTAGGGCTGTGTGACAATTTGTTGAC 2000642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398296733956
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