Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 4e-26
seq2 107 2e-18
seq3 105 6e-18
>seq4
Length=1814878
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || |||||||| ||||| || |||||||||||||||| | |
Sbjct 1484240 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 1484181
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || |||||||||||||| |||||||| || |||||
Sbjct 1484180 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 1484121
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| || || || | || ||| | || | || || ||||||
Sbjct 1484120 CAACGTCTGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484061
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| || || ||||||||| | || || ||| | ||||
Sbjct 1484060 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTAAGATT 1484023
Score = 131 bits (144), Expect = 1e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| |||||||||||||| |||| ||||| || |||||||||| ||||| |
Sbjct 1484928 AAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTC 1484869
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | || || ||||| || |||||||| ||||| |||||||| || ||
Sbjct 1484868 ATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGA 1484809
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| |||||| | || ||||| || || || | || || | || | || |||||
Sbjct 1484808 CCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTA 1484749
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||| ||||| ||||||||| | || || ||| | ||||
Sbjct 1484748 CAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATT 1484707
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || |||||||| ||||| || |||||||||||||||| | |
Sbjct 1484468 ATGCAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 1484409
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || |||||||||||||| |||||||| || || ||
Sbjct 1484408 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1484349
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || || || || || ||| | || | || || ||||||
Sbjct 1484348 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484289
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || ||||| || || | || |||
Sbjct 1484288 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGGTGGT 1484241
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| |||| ||||| || |||||||||| || || | |
Sbjct 1484012 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 1483953
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | ||||| || |||||||||||||| |||||||| || || ||
Sbjct 1483952 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1483893
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || || || | || || | || | || ||||||||
Sbjct 1483892 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 1483833
Query 22399 ATTCAAAAAGAATCCAC 22415
|||||||| ||||||||
Sbjct 1483832 ATTCAAAAGGAATCCAC 1483816
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || ||||| || | || ||||| || ||| | |
Sbjct 1484696 ATGCAGATCTTCGTCAAGACCTTGACAGGTAAGACTATTACCCTTGAGGTAGAATCGTCG 1484637
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || || |||||||||||||| |||||||| || || ||
Sbjct 1484636 GATACCATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1484577
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || || || || || ||| | || | || || ||||||
Sbjct 1484576 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484517
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || ||||| || || | || |||
Sbjct 1484516 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGGTGGT 1484469
>seq2
Length=2396783
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| ||||| || || || ||||||||||| || | || | ||||| || |
Sbjct 893038 AAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTC 892979
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| |||| ||| | ||| || |||| || |||||||||||||| || ||||| || ||
Sbjct 892978 CTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGA 892919
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||||||| | || ||||| || || || | || || | || | || || ||
Sbjct 892918 CCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTA 892859
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||| || || || || || | || | ||| || ||||| | || |||
Sbjct 892858 CAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGT 892807
Score = 82.4 bits (90), Expect = 6e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756
|| ||||||||||| || || || ||| || | | |||||| |||||||| |
Sbjct 390419 ATGGAGGCCAAATTACACACTGCGATTTGGTCCCTTGAAGAGTACTCCACAATTTCACAG 390478
Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816
||||||||| | || || || ||||| | |||| ||| |||| |||||||||
Sbjct 390479 CACAAATTAGAACATTGTATTGTACCCAAGTTGCTTTGGTTAGATTTCCTGTTGCAAGAG 390538
Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAAT 129866
||||| |||| |||| |||| || || || || | ||| | || |||||
Sbjct 390539 TCTTTATACAACATGAACGGAGTCCCTGTCTCAATTTGAGCGTCTACAAT 390588
>seq3
Length=2260675
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || || || | |||||||| || |||| | || ||||| |
Sbjct 1393535 AAAATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCT 1393476
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| || | ||| | |||| || ||||| ||||||||||| ||||| || ||
Sbjct 1393475 TCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGAC 1393416
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||| ||||| || ||||| || || || || |||||| | || | || || |||
Sbjct 1393415 CAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 1393356
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| || || || | || || || | ||||| | || |||
Sbjct 1393355 AACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGGT 1393305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727964191955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |