Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 167 4e-36 seq2 163 5e-35 seq3 154 3e-32 >seq4 Length=1814878 Score = 167 bits (184), Expect = 4e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || || || || ||||||||||| || || || || || || |||||| Sbjct 1484257 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 1484316 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | | ||| ||||| || ||||| |||||||||||| Sbjct 1484317 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 1484376 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | ||| ||| || || ||||||| ||| || ||||| | ||||| || Sbjct 1484377 TGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTC 1484436 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| |||||||| Sbjct 1484437 TTACCAGTTAAAGTCTTGACGAAAATCTGCAT 1484468 Score = 167 bits (184), Expect = 4e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || || || || ||||||||||| || || || || || || |||||| Sbjct 1484485 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 1484544 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | | ||| ||||| || ||||| |||||||||||| Sbjct 1484545 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 1484604 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | ||| ||| || ||||| || | |||||||| || | ||| || || Sbjct 1484605 TGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACCTCAAGGGTAATAGTC 1484664 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||||||| |||||||| Sbjct 1484665 TTACCTGTCAAGGTCTTGACGAAGATCTGCAT 1484696 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||||||||| || ||||| || ||||| || || ||||| || || || || || ||| Sbjct 1483801 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 1483860 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | ||||| || ||||| || | | ||| ||||| || ||||| |||||||||||| Sbjct 1483861 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 1483920 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | |||||| || || || |||| ||| ||||| || | ||||| || Sbjct 1483921 TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTC 1483980 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| |||||||| Sbjct 1483981 TTACCAGTTAGAGTCTTGACGAAAATCTGCAT 1484012 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| || || |||||||| || || || || || || |||||||| Sbjct 1484032 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 1484091 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || || | ||| || || || ||||| ||||||||||||||| Sbjct 1484092 AGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 1484151 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||| ||| || || ||||||| ||| || ||||| | ||||| || || Sbjct 1484152 ATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTA 1484211 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||||| || |||||||| Sbjct 1484212 CCAGTTAAAGTCTTGACAAAAATCTGCAT 1484240 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| || ||||||||||| ||||| || || || || || ||||| Sbjct 1484716 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 1484775 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | | ||| ||||| || ||||| |||||||| |||||| Sbjct 1484776 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 1484835 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||| || || ||||||| ||| || || || | ||||| || || Sbjct 1484836 ATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTA 1484895 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || ||||| || || || ||||||||| Sbjct 1484896 CCTGTTAGGGTTTTAACAAAAATCTGCATT 1484925 >seq2 Length=2396783 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | || ||||| || |||||||| || || || || || || || ||||| Sbjct 892826 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 892885 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | | ||||||||| || ||||| ||||||||||||||| Sbjct 892886 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGA 892945 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| ||||||||||| | || || ||||||||||| || || || Sbjct 892946 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTA 893005 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | |||||||||||| ||||||||| Sbjct 893006 CCGGTTAAGGTCTTGACGAAAATCTGCATT 893035 >seq3 Length=2260675 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || ||||| ||||||||||| || || || | || || ||||| || Sbjct 1393324 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 1393383 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || || | |||||||| || ||||| || |||||||| ||| Sbjct 1393384 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGA 1393443 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| || || ||||| | || || || ||||||||||| || || Sbjct 1393444 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTA 1393503 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| ||||| || |||||| || Sbjct 1393504 CCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 1393536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040