Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq4 98.7 1e-15 seq2 93.3 4e-14 >seq3 Length=2260675 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| || ||| | ||||| | ||| ||||| | | Sbjct 1393339 GACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCA 1393398 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||||||||| ||||| || || || ||||| ||| | || | || | Sbjct 1393399 AAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTGAC 1393457 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| ||||||||||| | || | || ||||| || || || | Sbjct 1393458 GTTG-TCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCT 1393516 Query 138599 TTACAAAAATCTGCAT 138614 |||| ||||| ||||| Sbjct 1393517 TTACGAAAATTTGCAT 1393532 >seq4 Length=1814878 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| || || | | | || |||||||| |||||||| || | ||| | ||| || Sbjct 1484715 AACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTC 1484774 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||| ||||| | | | |||| ||| || ||||| ||||| |||||||| || || | Sbjct 1484775 CAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCT-T 1484833 Query 138525 GATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | ||| | | || | ||||| | ||||||||||| | || | || | Sbjct 1484834 GAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCT 1484893 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || || ||||| |||||||||||||| Sbjct 1484894 TACCTGTTAGGGTTTTAACAAAAATCTGCAT 1484924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| || || | | | || ||||| || ||||||||||| | ||| | || || Sbjct 1484031 AACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTC 1484090 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||| ||||| | | |||| ||||| || || || ||||| |||||||| ||||| | Sbjct 1484091 CAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT-T 1484149 Query 138525 GATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | |||| | || | ||||| | |||||||| || | || | || | Sbjct 1484150 GAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCT 1484209 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| | ||| || |||||||||||||| Sbjct 1484210 TACCAGTTAAAGTCTTGACAAAAATCTGCAT 1484240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||| ||||| || | ||| | ||| || ||||| ||||| | Sbjct 1483819 GATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCG 1483878 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| | ||| || ||||| ||||| |||||||| ||||| ||| | || | ||| | Sbjct 1483879 AAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTC-TTGAATCTTAGATTTGAC 1483937 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || || | ||||| ||||| | || | || |||||||| ||||| || Sbjct 1483938 GTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTT 1483997 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 1483998 GACGAAAATCTGCAT 1484012 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || || | | || |||||||| ||||||||||| | ||| | || Sbjct 1484257 AAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCT 1484316 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||| | |||| | ||| || ||||| ||||| |||||||| ||||| Sbjct 1484317 TCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 1484376 Query 138523 GTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| | || | |||| | || | ||||| | |||||||| || | || | || Sbjct 1484377 -TGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGT 1484435 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| | ||| || || ||||||||||| Sbjct 1484436 CTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 1484468 >seq2 Length=2396783 Score = 93.3 bits (102), Expect = 4e-14 Identities = 173/250 (69%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || ||| | || | | |||||||| || ||||||||||| | Sbjct 892808 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 892867 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| ||||| | | | || | ||| |||||||| ||||| Sbjct 892868 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 892927 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || |||| || | |||||||| ||||| | Sbjct 892928 ATTCCTTCCTTGTC-TTGAATCTTGGACTTGACATTG-TCGATGGTGTCGGAGGACTCGA 892985 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA----TGGCTTAT 138621 | || | || | || ||||| || | || || || |||||||||| || ||| | Sbjct 892986 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTTTT 893045 Query 138622 AATATTATTC 138631 ||| ||| || Sbjct 893046 AATGTTAGTC 893055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262356577040