Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 1e-32
seq4 140 8e-28
seq2 134 3e-26
seq1 84.2 5e-11
>seq3
Length=2260675
Score = 156 bits (172), Expect = 1e-32
Identities = 170/225 (76%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| ||||| | ||| | ||| ||||||||||||| ||||||||||| |||||| || ||
Sbjct 1393317 TCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1393376
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| || || ||||| |||||||| ||||| ||| |||||| ||
Sbjct 1393377 ATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTT 1393436
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||||||||| ||| ||| || | ||||| | | || || ||||| |||||
Sbjct 1393437 GTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGAT 1393496
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGC 199638
|||||||| || || || || || |||||||| |||||| ||
Sbjct 1393497 AGTCTTACCGGTAAGGGTCTTTACGAAAATTTG---CATTTTGGC 1393538
>seq4
Length=1814878
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||| | || | ||||||||| || |||||||||| ||||||||||| | ||| ||
Sbjct 1484251 AGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTA 1484310
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|||||||||| ||||| || |||||||| | ||| |||||||| ||| ||| |||||
Sbjct 1484311 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCC 1484370
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| |||||||| ||| ||| || | ||||||| || || || || | |||
Sbjct 1484371 TTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTG 1484430
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || | ||| || || ||||| ||
Sbjct 1484431 ATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTG 1484465
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | |||||| || || ||||| |||| ||||||||||| | ||| || ||
Sbjct 1484025 TCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACC 1484084
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||||| ||||| || || ||||| ||||| ||||| || ||| ||| |||||
Sbjct 1484085 ATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTT 1484144
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| ||| ||| || | ||||||| || || || || | |||||
Sbjct 1484145 GTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGAT 1484204
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || |||||||| ||
Sbjct 1484205 AGTCTTACCAGTTAAAGTCTTGACAAAAATCTG 1484237
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||| | || | ||||||||| || |||||||||| ||||||||||| | ||| ||
Sbjct 1484479 AGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTA 1484538
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|||||||||| ||||| || |||||||| | ||| |||||||| ||| ||| |||||
Sbjct 1484539 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCC 1484598
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| |||||||| ||| ||| || | ||| || | | |||||| || | ||
Sbjct 1484599 TTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACCTCAAGGGTA 1484658
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || | || || || || || ||
Sbjct 1484659 ATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTG 1484693
>seq2
Length=2396783
Score = 134 bits (148), Expect = 3e-26
Identities = 167/228 (73%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| || ||||| | ||| |||||||| |||| ||||||||||| || ||| || ||
Sbjct 892819 TCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACC 892878
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || || || | ||| || ||||| ||| |||||||||
Sbjct 892879 GTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTT 892938
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| |||||||| ||| || |||| |||||| | | || || ||||| || ||
Sbjct 892939 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 892998
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641
|||||||| || | || || || ||||| || |||||| | |||
Sbjct 892999 AGTCTTACCGGTTAAGGTCTTGACGAAAATCTG---CATTTTTGTCTT 893043
>seq1
Length=2891404
Score = 84.2 bits (92), Expect = 5e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| ||||| || | ||||| || ||||| || | ||| ||| | | ||| || |
Sbjct 1096813 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 1096872
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || ||
Sbjct 1096873 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 1096932
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
| || || || || | || || | ||| |||| || |||||||| | ||| | ||
Sbjct 1096933 AATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAAC 1096992
Query 167948 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 167991
|| |||||| ||| || || || || || |||||||| || ||
Sbjct 1096993 AGGGTCCAATCGCCATTCTGT-TCTACTCTTTTCATGAACAGATC 1097036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921494265469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |