Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 226 1e-53 seq4 179 1e-39 seq2 127 8e-24 >seq3 Length=2260675 Score = 226 bits (250), Expect = 1e-53 Identities = 863/1325 (65%), Gaps = 51/1325 (4%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| |||| ||||| | | ||| ||||| ||||| ||| || ||||| Sbjct 477996 GGAAAGCCTAATATCCAAGTCGAATTTAAGGGTGAGACTAAGGTTTTCAGCCCCGAAGAG 478055 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || |||||||| || |||||||| || || || || || ||| | ||| | Sbjct 478056 ATTTCCTCCATGGTTCTAACAAAAATGAAGGATACTGCTGAGCAGTATTTGGGTGAGAAA 478115 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 | | |||||||| | |||||||| ||||| |||||||| | ||| | ||||| || Sbjct 478116 ATCAACGATGCAGTTGTCACTGTTCCTGCTTACTTCAATGACTCTCAAAGACAAGCCACC 478175 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||||||||||| || |||| |||| |||||||| || || || Sbjct 478176 AAGGATGCTGGTTTGATTGCTGGTTTGAACGTTCAAAGAATCATTAATGAGCCCACCGCT 478235 Query 451433 GCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTT 451487 || || | || || ||||| || | || | | || | || | || ||| Sbjct 478236 GCCGCAATTGCTTACGGGTTGGACAAGAAGGAT-GCAGGCCAC-GGTGAGCACAACATTC 478293 Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547 || | || ||| | |||||||||||| ||| |||| |||| || ||||| || ||| Sbjct 478294 TAATCTTCGATCTAGGTGGAGGAACTTTCGATGTTTCTCTACTATCTATTGATGA--GGG 478351 Query 451548 TATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| ||||| ||| ||||| || || | || ||||| || | ||||| Sbjct 478352 TATTTTCGAAGTCAAGGCCACCGCAGGTGACACCCACTTGGGTGGTGAGGACTTCGATAA 478411 Query 451606 TGCAATTGTGGAATGGTTGAAAACTGATGTTCAA-CGAAA-ACTAAAAGTAGATATTTCT 451663 | | || | || | | || |||||| |||| || || | |||| ||||| Sbjct 478412 CAGATTAGTCAACCACTTTATCGCCGA-GTTCAAGAGAAAGACCAAGA-AAGATCTTTCT 478469 Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAAC-----ATCAGCAGAAAAAGCTAAAATTA 451718 || ||||| | | | |||||| | || | ||| | ||| |||| || || Sbjct 478470 ACAAACCAGAGATCCCTTAGAAGACTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTG 478529 Query 451719 CACTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATT 451778 || ||| | || || || || | |||||| ||| | || || || || Sbjct 478530 TCTTC--TTCTGCTCAGAC--CT-CCATCGAGATTGATTCTTTGTTCGAGGGTATCGA-- 478582 Query 451779 ATGCTACTACTC--TTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACG 451836 | |||| ||| | || | |||| ||| || | ||| || | || | || Sbjct 478583 CTTCTACACCTCGATCACTAGAGCTAGATTCGAGGAGCTCTGTGCC--GACTTGTTCAGA 478640 Query 451837 GGTA--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATT 451894 | || | |||||||| ||| || | || || || | ||| | || || Sbjct 478641 TCCACCATCGAGCCTGTTGAGAGAGTCTTGAAAGACTCCAAGTTGGACAAATCTCAAGTT 478700 Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954 |||| ||||| | || || |||||||| ||||||| || ||| ||| || | || | Sbjct 478701 CATGAGATTGTTTTGGTTGGTGGTTCTACCAGAATTCCAAAGGTTC-AGAAAT-TAGT-T 478757 Query 451955 TCTTA-TTTTGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 ||| | |||| | || || | | | ||| | | || || || ||||| |||||| Sbjct 478758 TCTGACTTTTTCAATGGTAAGGAGCCAAACAAGTCCATCAACCCAGACGAAGCCGTTGCA 478817 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA---TGATGAAAAATTAGGA 452068 ||||||||||| || |||||||||||| | | || ||| | | || | | Sbjct 478818 TATGGTGCTGCTGTCCAAGCAGCTATTTTGTCTGG---AGATACTTCTTCCAAGACACAA 478874 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 || | | || | ||||| | ||||||||| | || ||||||| |||||||| || Sbjct 478875 GACTTGTTATTGCTGGATGTTGCTCCTCTATCTTTGGGTATTGAAACCGCTGGTGGTATC 478934 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTC-TATTCCTTGTAAAAAGAGTC--AAACATTT 452185 ||||| || | || | || |||| | | ||| | |||| |||| ||| ||| Sbjct 478935 ATGACCAAGCTGAT--CCCAAGAAACTCCACAATCCCAGCCAAAA-AGTCAGAAATCTTT 478991 Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| ||| |||||||||||||| |||||||| |||||||| || | | Sbjct 478992 TCGACATATGCTGACAACCAACCAGGTGTTTTGATTCAAGTCTTTGAAGGTGAGAGAACT 479051 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 | || || || || | || | ||| ||||| ||||||||| ||| Sbjct 479052 AGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAACTTTCTGGTATTCCTCCTGCTCCA 479111 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || |||||||||||| | |||| ||| | ||||| || |||||| | ||||| Sbjct 479112 AGAGGTGTTCCTCAAATTGAGGTCACCTTCGATATGGATGCCAACGGTATTTTGAATGTA 479171 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425 ||| ||||| || | || || | |||| ||||| ||||| || ||||| Sbjct 479172 TCTGCTGTTGAGAAGGGTACCGGTAAGACTCAAAAGATTACTATTACCAACGATAAGGGA 479231 Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485 | || || || ||||| || || | |||||| |||||| ||||||||||||||||| Sbjct 479232 AGATTGTCCAAGGAAGACATCGAGAGAATGGTTTCTGAAGCTGAAAAATTCAAGGATGAA 479291 Query 452486 GATGA 452490 || || Sbjct 479292 GACGA 479296 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || ||||| ||||| || | || || || || || Sbjct 1393533 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 1393474 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | || || ||||| || ||||| |||||||||||||| || Sbjct 1393473 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 1393414 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || ||| | || ||||| ||||||||| | || || || Sbjct 1393413 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 1393354 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || | ||| ||||||| Sbjct 1393353 CATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGG 1393309 Score = 84.2 bits (92), Expect = 9e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 163325 AAAAAGTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATC 163384 ||| ||| |||||||||| ||||||||| ||||| | ||| ||| || ||| |||| Sbjct 503773 AAAGAGTGGGAAATTTTAGAATAGAACCACCTGGACTCTTTAGAGGAAGGGGTAGTCATC 503714 Query 163385 CAAAAATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATA 163444 | || | || | | ||| | |||||||||||| |||||||| | ||| || || | Sbjct 503713 CGAAGACTGGCAGAGTGAAGAAAAGAATATATCCCGAAGATGTAAGTTTGAACTTGAGTG 503654 Query 163445 AAAATGCACCTATTCC 163460 || |||| || ||||| Sbjct 503653 AAGATGCTCCAATTCC 503638 >seq4 Length=1814878 Score = 179 bits (198), Expect = 1e-39 Identities = 174/224 (78%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || |||||||| ||||| |||||||| || || ||||| Sbjct 1484012 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 1483953 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || |||||||| |||||||| ||||||||||| || Sbjct 1483952 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1483893 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || ||||| ||||| || |||||| | | ||||| ||| Sbjct 1483892 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 1483833 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||| ||||||||||| ||||| Sbjct 1483832 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGAGG 1483789 Score = 158 bits (174), Expect = 5e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||| || || ||||| ||||| |||||||| || || ||||| Sbjct 1484925 AATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 1484866 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| || ||||||||||||||||| ||||||||||| || Sbjct 1484865 AGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCA 1484806 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||||||||| | || || ||||| ||||| || |||||| | | ||||| || Sbjct 1484805 GCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAA 1484746 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || ||||| | || || Sbjct 1484745 CATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGGGG 1484701 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| ||||| |||||||| ||||| || ||||| || Sbjct 1484696 ATGCAGATCTTCGTCAAGACCTTGACAGGTAAGACTATTACCCTTGAGGTAGAATCGTCG 1484637 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| |||| || |||||||| |||||||| ||||||||||| || Sbjct 1484636 GATACCATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1484577 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || ||| | |||||||| |||||| | | || || || Sbjct 1484576 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484517 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || |||||||||||||| Sbjct 1484516 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGG 1484473 Score = 149 bits (164), Expect = 2e-30 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | |||||||| | | |||||||| ||||| || |||| ||||| Sbjct 1116768 GGAAAGCCAAACATTCAAGTTGAATTCAAAGGTGAGACTAAGGTCTTCACTCCAGAAGAG 1116827 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || |||||| | || || ||||| || || || || |||| ||||| Sbjct 1116828 ATCTCTTCCATGGTTTTGACCAAGATGAAGGACACTGCTGAGCAATTCCTTGGTGACAAG 1116887 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| ||||| || | ||||| || ||||| ||||| || | || | || || ||| Sbjct 1116888 GTTAACGATGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACT 1116947 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||||| || ||| | |||| || || || || || || Sbjct 1116948 AAGGATGCTGGTCTCATTGCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCT 1117007 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || | ||| || ||||| | || || || || | | Sbjct 1117008 GCTGCCATTGCCTACGGTTT-GGACAA--AAAAGCTGAGGGTGAGAAGAACGTTCTGATC 1117064 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || || || |||||||||||| ||| |||| | || || |||||||| || | || Sbjct 1117065 TTCGACTTGGGTGGAGGAACTTTCGATGTTTCTTTGCTGTCCATTGAAGACGGTATTTTC 1117124 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || |||||| ||||| |||| ||||| || |||| || Sbjct 1117125 GAGGTCAAGGCTACTGCTGGTGACACTCACTTAGGTGGTGAGGACTTTGACAA 1117177 Score = 147 bits (162), Expect = 9e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || | |||||||| ||||| |||||||| || || ||||| Sbjct 1484468 ATGCAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 1484409 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || || |||||||| |||||||| ||||||||||| || Sbjct 1484408 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1484349 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || ||| | |||||||| |||||| | | || || || Sbjct 1484348 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484289 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || |||||||||||||| Sbjct 1484288 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGG 1484245 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || | |||||||| ||||| |||||||| || || ||||| Sbjct 1484240 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 1484181 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || || |||||||| |||||||| |||||||||||||| Sbjct 1484180 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 1484121 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || ||||| |||||||| |||||| | | || || || Sbjct 1484120 CAACGTCTGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAAC 1484061 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || ||||| | ||||| Sbjct 1484060 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGAGG 1484017 >seq2 Length=2396783 Score = 127 bits (140), Expect = 8e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || | || ||||| |||||||| | || || || || || Sbjct 893035 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTC 892976 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | | || || |||||||| |||||||||||||||||||| || Sbjct 892975 CGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 892916 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| ||||| | || || ||||| ||||| || |||||| || | || || || Sbjct 892915 ACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAA 892856 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||| | || | ||| ||||||| Sbjct 892855 CATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGG 892811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718222802756