Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3 306 2e-77 seq4 185 6e-41 seq2 136 3e-26 >seq3 Length=2260675 Score = 306 bits (338), Expect = 2e-77 Identities = 656/969 (68%), Gaps = 20/969 (2%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 |||||| || || || ||||||| | || || ||| ||||| || | || || Sbjct 478314 GGAACTTTCGATGTTTCTCTACTATCTATTGATGAGGGTATTTTCGAAGTCAAGGCCACC 478373 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGTG 475427 || || || | || | |||||||| || || ||||| ||| | || | || | | Sbjct 478374 GCAGGTGACACCCACTTGGGTGGTGAGGACTTCGATAACAGATTAGTCAACCAC--TTTA 478431 Query 475428 TTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTAAGAC 475487 | | || |||||||| || | || |||||||| ||| | | | | ||| Sbjct 478432 TCGCCGAGTTCAAGAGAAAGACCAAGAAAGATCTTTCTACAAACCAGAGATCCCTTAGAA 478491 Query 475488 GTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTG 475547 | || ||||| |||||||| ||||| ||| || || | |||||| || |||| || | Sbjct 478492 GACTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTGTCTTCTTCTGCTCAGACCTCCA 478551 Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAA 475606 | || |||||||| | || || || || || || || ||| || || || |||| | Sbjct 478552 TCGAGATTGATTCTTTGTTCGAGGGTATCGACTTCTACACCTCG-ATCACTAGAGCTAGA 478610 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || | ||| | || | || ||| || || || || ||||| ||| | Sbjct 478611 TTCGAGGAGCTCTGTGCCGACTTGTTCAGATCCACCATCGAGCCTGTTGAGAGAGTCTTG 478670 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || || | |||||||| ||||| ||||| |||||| | || || ||||| || Sbjct 478671 AAAGACTCCAAGTTGGACAAATCTCAAGTTCATGAGATTGTTTTGGTTGGTGGTTCTACC 478730 Query 475727 AGAATTCCAAA-AATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGA 475785 ||||||||||| | ||| || | |||| | ||| |||||||| || ||| Sbjct 478731 AGAATTCCAAAGGTTCAGA-AATTAGTTTCTGACTTTTTCAATGGTAAGGAGCCAAA--C 478787 Query 475786 AAGT--GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843 |||| | || || || ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 478788 AAGTCCATCAACCCAGACGAAGCCGTTGCATATGGTGCTGCTGTCCAAGCAGCTATTTTG 478847 Query 475844 TC---AGGTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACTCCACT 475899 || || | || | ||| || | | |||| ||| | || || |||| || Sbjct 478848 TCTGGAGATACTTCTTCCAAGACACAAGA----CTTGTTATTGCTGGATGTTGCTCCTCT 478903 Query 475900 TTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCC 475959 || || ||| ||||||| | ||| || || ||||| || || || ||||| | | Sbjct 478904 ATCTTTGGGTATTGAAACCGCTGGTGGTATCATGACCAAGCTGATCCCAAGAAACTCCAC 478963 Query 475960 TATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAAC 476019 |||||| |||||| ||| || | ||||| || ||| |||| || ||| || ||| Sbjct 478964 AATCCCAGCCAAAAAGTCAGAAATCTTTTCGACATATGCTGACAACCAACCAGGTGTTTT 479023 Query 476020 CATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTT 476079 || ||| ||||||||||||| |||| || || || || ||| | || | || Sbjct 479024 GATTCAAGTCTTTGAAGGTGAGAGAACTAGAACCAAGGACAACAACCTGTTGGGTAAGTT 479083 Query 476080 TAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGA 476139 | | ||| ||||||||||||||||| ||||| |||||||||||||| || || || || Sbjct 479084 TGAACTTTCTGGTATTCCTCCTGCTCCAAGAGGTGTTCCTCAAATTGAGGTCACCTTCGA 479143 Query 476140 TATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAA 476199 ||| ||||| || |||||| | ||||| ||||| ||| || || |||| | | Sbjct 479144 TATGGATGCCAACGGTATTTTGAATGTATCTGCTGTTGAGAAGGGTACCGGTAAGACTCA 479203 Query 476200 AAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGT 476259 ||| || |||||||| ||| || || ||||| | | ||| | || | | ||||| Sbjct 479204 AAAGATTACTATTACCAACGATAAGGGAAGATTGTCCAAGGAAGACATCGAGAGAATGGT 479263 Query 476260 TGATGAAGC 476268 | |||||| Sbjct 479264 TTCTGAAGC 479272 Score = 176 bits (194), Expect = 3e-38 Identities = 379/556 (68%), Gaps = 18/556 (3%) Strand=Plus/Plus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAAA 474388 ||||||| |||||||| || || || ||| |||||| || ||| || || || | Sbjct 477718 CAATTGGAATTGATTTGGGTACCACATACTCTTGTGTGGCACATTTTGCTAA-TGATCGT 477776 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || || || ||||||||||| || || || ||||| | || | ||||| Sbjct 477777 GTTGAGATCATAGCTAACGACCAAGGTAACAGGACGACTCCATCGTTCGTCGCCTTTACC 477836 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || |||||| | ||||| |||||||| || | |||||||| ||||| | ||| Sbjct 477837 GACACTGAAAGATTGATTGGTGATGCTGCAAAGAACCAAGCTGCCATGAATCCAGCTAAC 477896 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATAC---CACTGTCCAA 474565 ||| |||| ||||| ||| | || || ||| | || || || || | ||| || Sbjct 477897 ACTGTTTTCGATGCCAAACGTTTAATCGGTAGAAAATTCGACGACCCGGAAACT---CAG 477953 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 | ||||| || | ||||| || || || || || || || || |||| || Sbjct 477954 GCCGATATTAAGCACTTCCCTTTCAAAGTTATCAACAAGGGGGGAAAGCCTAATATCCAA 478013 Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGT 474681 | ||| | | ||||| ||||| |||||| || ||| | ||||| || ||||| Sbjct 478014 GTCGAATTTAAG--GGTGAGACTAA--GGTTTTCAGCCCCGAAGAGATTTCCTCCATGGT 478069 Query 474682 TTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 | || | |||||||| | || || |||| ||| | || | || | | ||||||| Sbjct 478070 TCTAACAAAAATGAAGGATACTGCTGAGC-AGTATTTGGGTGAGAAAATCAACGATGCAG 478128 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 | | |||||||| || || || ||||| |||||| | ||||| || || ||||| || Sbjct 478129 TTGTCACTGTTCCTGCTTACTTCAATGACTCTCAAAGACAAGCCACCAAGGATGCTGGTT 478188 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 ||||| ||| | || ||| | | || |||||||| || || || |||||| |||||| Sbjct 478189 TGATTGCTGGTTTGAACGTTCAAAGAATCATTAATGAGCCCACCGCTGCCGCAATTGCTT 478248 Query 474861 ATGGTCTTGATAAGAA 474876 | || | || ||||| Sbjct 478249 ACGGGTTGGACAAGAA 478264 Score = 118 bits (130), Expect = 7e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| | |||||| ||| || | |||||| |||||||| || ||||| ||| Sbjct 1393354 TTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGT 1393413 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || |||||||||||||| |||||||| |||||||| ||||| |||||||| || Sbjct 1393414 TGGTCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCG 1393473 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | | ||| ||| ||||| |||||||| || ||||| ||||||||||| Sbjct 1393474 GAAGACTCCACCTCCAA-GGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTG 1393529 Score = 107 bits (118), Expect = 1e-17 Identities = 254/384 (66%), Gaps = 0/384 (0%) Strand=Plus/Plus Query 475471 TGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTC 475530 ||| | ||| || ||| | | |||||||||||||| ||||||||| || || | ||||| Sbjct 1408842 TGCCAGAGCCTTGAGAAGATTGAGAACTGCTTGTGAGCGTGCTAAGAGAACTTTGTCTTC 1408901 Query 475531 TGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCT 475590 || | |||| || || |||||||| || || | || || || || | | | || Sbjct 1408902 TGTTGCTCAGACCACGGTTGAAGTCGACTCCTTGTTCGATGGTGAAGACTTCACTGCTGA 1408961 Query 475591 TATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACC 475650 || | || |||||||| || | ||| ||||| | || | || | || || Sbjct 1408962 AATCTCCAGAGCTAAATTCGAGGCTATCAACGCTGATTTGTTCAAGTCTACTTTGGAGCC 1409021 Query 475651 CGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCT 475710 |||||||||||| | | || || || | || ||||| | ||| |||| | || | Sbjct 1409022 TGTTGAACAAGTTTTGAAGGACTCAAAGATCGAGAAATCCAAGGTCGATGACGTCGTCTT 1409081 Query 475711 TGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGG 475770 || || ||||| || ||||||||||| | | | || | || | || |||| Sbjct 1409082 GGTTGGTGGTTCCACCAGAATTCCAAAGGTCCAAAAGCTGTTGTCTGACTTCTTCGATGG 1409141 Query 475771 TAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCA 475830 ||| | || | || | || |||||||| ||||| || || || || || || || Sbjct 1409142 TAAGCAATTGGAGAAATCCATCAACCCTGATGAGGCTGTCGCTTACGGTGCCGCCGTTCA 1409201 Query 475831 AGCAGCTATTTTATCAGGTCAATC 475854 || |||||||| | |||||||| Sbjct 1409202 AGGTGCTATTTTGACCGGTCAATC 1409225 Score = 87.8 bits (96), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 867531 AGCTAACCATTCTACTGTTTGATCATGAATAATATCCATCCATTGATGACC---AGGAAG 867587 ||| ||||| | ||||| | |||||| | || || ||||||| || || |||| | Sbjct 503574 AGCCAACCAAGCAACTGTATTATCATGTTTGATTTCTTTCCATTGGTGTCCTTCAGGAGG 503633 Query 867588 AGGTTCAGGAACGGGAGCATTTTTTCCAATATTAATAATAATATCTTCAGGATAAATTCt 867647 ||| ||||| ||||||| || | | || | | | | |||||| ||||| ||||| Sbjct 503634 AGG---AGGAATTGGAGCATCTTCACTCAAGTTCAAACTTACATCTTCGGGATATATTCT 503690 Query 867648 ttttttGACATGTCCTGATTTAGGATTACAACCTCTTCCTAAAAATATACCTGGTGGTTC 867707 ||| || || || | || |||| || ||| |||||| ||| | || |||||||| Sbjct 503691 TTTCTTCACTCTGCCAGTCTTCGGATGACTACCCCTTCCTCTAAAGAGTCCAGGTGGTTC 503750 Query 867708 AATTCTAAAATTACCTAC 867725 ||||||||||| || || Sbjct 503751 TATTCTAAAATTTCCCAC 503768 >seq4 Length=1814878 Score = 185 bits (204), Expect = 6e-41 Identities = 561/860 (65%), Gaps = 24/860 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 |||||| || || |||| || || | ||||| ||| ||||| || | || || Sbjct 1117080 GGAACTTTCGATGTTTCTTTGCTGTCCATTGAAGACGGTATTTTCGAGGTCAAGGCTACT 1117139 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGTG 475427 ||||| || | || | |||||||| || ||||| || ||| | || | || | Sbjct 1117140 GCTGGTGACACTCACTTAGGTGGTGAGGACTTTGACAACAGATTGGTCAACCAC--TTCA 1117197 Query 475428 TTGAAGATTTCAAGAGGAAAAATAA-----AGTTGATCTTTCAACATCTGCTAA-AGCAT 475481 | | || |||||||| || || || | ||| |||| ||| | || ||| | Sbjct 1117198 TCGCTGAATTCAAGAGAAAGAACAAGAAGGACTTG-TCTTCAAAC-----CAAAGAGCTT 1117251 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 | ||| | | ||||| || ||||| ||||||||| || || | |||||| || |||||| Sbjct 1117252 TGAGAAGATTGAGAACCGCCTGTGAGCGTGCTAAGAGAACTTTGTCTTCTTCTGCTCAAA 1117311 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGG 475601 || | | || | || ||| | |||||||| |||| | | | ||| | | || || | Sbjct 1117312 CTTCCATCGAGATCGACTCTTTGTTTGAAGGTGTTGACTTTTACACTTCTTTGACCAGAG 1117371 Query 475602 CTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAG 475661 | | ||| || || | ||| |||||| || ||| || ||||| || || || | | Sbjct 1117372 CCAGATTCGAGGAACTGTGTGGTGATCTATTCAGATCTACCATTGAGCCTGTGGAGAAGG 1117431 Query 475662 TTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTT 475721 || | | || |||| | ||||| || |||||| | || ||||| | || || |||| Sbjct 1117432 TTTTGAAGGACGCTAAGTTGGACAAGTCCCAAGTCAACGAGATTGTCTTGGTTGGTGGTT 1117491 Query 475722 CAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAA 475781 | || ||||||||||| | | | || | || | || || ||||| | || Sbjct 1117492 CCACCAGAATTCCAAAGGTCCAAAAGTTGGTGTCTGACTTCTTCAACGGTAAGGAACCAA 1117551 Query 475782 ATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTT 475841 | | | | || || ||||| |||||||| || || || ||||| ||||| |||||| Sbjct 1117552 ACAGATCTATCAACCCAGATGAGGCTGTTGCCTACGGTGCCGCTGTGCAAGCTGCTATTC 1117611 Query 475842 TATCAGGTCA---ATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACGTAACTCCA 475897 | || ||| | || | ||| | | || |||| |||| ||||| |||| Sbjct 1117612 TTTCCGGTGACACTTCCTCCAAGACCCAAGAT----TTGTTGCTGTTGGACGTTGCTCCT 1117667 Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT 475957 || || | ||| |||| || | ||| || || ||||| || || || ||||| || Sbjct 1117668 CTGTCCCTGGGTATTGAGACTGCTGGTGGTATCATGACCAAGCTGATCCCAAGAAACTCT 1117727 Query 475958 CCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTA 476017 | |||||| ||| || || | || |||||||| |||| || ||| || ||| Sbjct 1117728 ACCATCCCAACCAAGAAGTCCGAGACTTTCTCCACTTACGCTGACAACCAACCAGGTGTG 1117787 Query 476018 ACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACT 476077 || || | | || ||||| ||| ||| || || ||| | | || | Sbjct 1117788 TTGATTCAGGTATACGAGGGTGAGAGAGCCAAGACTGCCGACAACAACTTATTGGGTAAG 1117847 Query 476078 TTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137 || | || ||||||||||| ||||| ||||| |||||||| || || || ||||| Sbjct 1117848 TTCGAGCTGTCTGGTATTCCTCCAGCTCCAAGAGGTGTTCCTCAGATCGAGGTCACTTTC 1117907 Query 476138 GATATTGATGCAAATGGTAT 476157 || || ||||| |||||||| Sbjct 1117908 GACATGGATGCCAATGGTAT 1117927 Score = 159 bits (176), Expect = 2e-33 Identities = 376/557 (68%), Gaps = 18/557 (3%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGC-TGTTTGGCAAAATGGTAAAGTAGA 474393 |||||||||||||||||||| ||| ||||| || ||| || |||| | || || Sbjct 1116495 GGTATTGATTTAGGAACTACATACTCATGTGTGGCACATTTCGC-CAATGATCGTGTTGA 1116553 Query 474394 AATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAAC 474453 || ||||| |||||||| ||||| ||||| || ||||||| || |||| ||||| || Sbjct 1116554 GATCATTGCAAATGACCAGGGTAACAGAACTACCCCATCATTCGTCGCTTTCACTGACAC 1116613 Query 474454 TGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTAT 474513 || || ||||| || |||||||| | |||||||| || || | || || | Sbjct 1116614 CGAGAGACTGATTGGTGACGCTGCTAAGAACCAAGCTGCTATGAACCCAGCCAACACCGT 1116673 Query 474514 TTTTGATGCTAAAAGATTGATTGGTCGTAATTT---TGATGATACCACTGTCCAATCTGA 474570 ||| || || || | ||||| ||| | || || |||| | || |||| |||| Sbjct 1116674 TTTCGACGCCAAGCGTTTGATCGGTAGAAAGTTCTCAGATGCTGAGAC---CCAAGCTGA 1116730 Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CA 474628 ||| || | || || ||||| | | ||||| || ||| | || ||| | Sbjct 1116731 TATCAAGCACTTCCCATTCAAGGTCGTTGACAAGGGTGGAAAGCCAAACATTCAAGTTGA 1116790 Query 474629 ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 || || |||||| ||||| || | || ||| | || ||||| |||||||| || Sbjct 1116791 ATTCA--AAGGTGAGACTAAGGTCTTCACTCCAGAAGAGATCTCTTCCATGGTTTTGACC 1116848 Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTG--GACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| | || || |||| || |||| |||||| || | ||||| || | Sbjct 1116849 AAGATGAAGGACACTGCTGAGC-AATTCCTTGGTGACAAG--GTTAACGATGCCGTTGTC 1116905 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| || || || || ||||| | || || ||||| ||||| || ||| Sbjct 1116906 ACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACTAAGGATGCTGGTCTCATT 1116965 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | || ||| | | || || || || ||||| || || || |||| || ||| Sbjct 1116966 GCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCTGCTGCCATTGCCTACGGT 1117025 Query 474866 CTTGATAAGAATTCTGA 474882 | || || || |||| Sbjct 1117026 TTGGACAAAAAAGCTGA 1117042 Score = 154 bits (170), Expect = 1e-31 Identities = 365/544 (67%), Gaps = 22/544 (4%) Strand=Plus/Plus Query 297133 AGATATTGGGGAACACCAATTCCAATTTGGAAATCTGATGATGGTGAAGAAATAATTTGT 297192 ||||||||||||||||| |||||| | ||| ||||||||| ||||||||| | ||| Sbjct 1393970 AGATATTGGGGAACACCTATTCCATTATGGGTTTCTGATGATTTTGAAGAAATTGTGTGT 1394029 Query 297193 ATTGGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATTGATAATATTAATGATTTACAT 297252 || |||||| || ||||| | | ||| | || || | | |||| | ||| |||| Sbjct 1394030 ATCGGTTCAATTCAAGAACTGAGAGATCTATCTGGCAACCAAGATATCACTGACATACAC 1394089 Query 297253 ATTGATAAAATTGATCAAATAAAAATTCCTTCTCGTAAAGGAAAAGGCATGTTATCTCGT 297312 ||| || ||||| | || | ||||||||| | ||||||| ||| || || | Sbjct 1394090 CGTGAAAAGATTGACGACATCACTATTCCTTCTAGACAAGGAAAGGGCGTGCTAAGAAGA 1394149 Query 297313 GTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCAT 297372 | | || || ||||||||||| || |||||||| |||||||| | ||||| || Sbjct 1394150 ATCGAAGAAGTGTTTGATTGTTGGTTCGAGTCAGGTTCCATGCCTTACGCTCAAAACCAC 1394209 Query 297373 TATCCTTTTGAAAATTCCGAAATTTTAGAC-ACTTCA---CAAGATTATATTGCAGATTT 297428 |||||||| ||| |||| ||| | |||| | | ||| ||| ||||| Sbjct 1394210 TATCCTTTCGAA-----GGAAA----GGACGAGTTCAGCTCCAAATT-CCCTGCTGATTT 1394259 Query 297429 TATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTAC 297488 ||| | ||| ||||||| || ||||||||||| || || || || || ||| Sbjct 1394260 CATATCGGAAGGTCTTGATCAGACCAGAGGTTGGTTCTACACCTTGACTGTGCTAGGTAC 1394319 Query 297489 AGCTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGC 297548 | || |||| || | | || ||||| || ||| | || || ||| || | Sbjct 1394320 TCACCTTTTCAACACTGCACCCTACAAGAATGTCATAGTTTCGGGTATCGTTCTAGCTGG 1394379 Query 297549 TGATGGACAAAAAATGTCAAAAAG--TAAAGGTAATTATCCTGATCCAAATATTTTGATG 297606 ||| || |||| ||||| || | | ||| || ||||| || || || || || Sbjct 1394380 TGACGGTAAAAAGATGTCCAAGCGTCTGAAG--AACTATCCAGACCCTGGAATAGTGTTG 1394437 Query 297607 GATAAATATGGTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAG 297664 || || ||||| ||| |||| |||||||| ||| ||||| | ||||| ||| || Sbjct 1394438 GACGGTTACGGTGCCGATGCTTTGCGTCTTTACTTA--ATCAACTCTCCTGTTCTTAGAG 1394495 Query 297665 CCGA 297668 |||| Sbjct 1394496 CCGA 1394499 Score = 141 bits (156), Expect = 6e-28 Identities = 157/204 (77%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 480580 TTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAA 480639 || |||| ||| ||| ||||||| |||||||| ||||| |||||||| ||||| | Sbjct 1483821 TTCCTTTTGAAT-ATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGA 1483879 Query 480640 AAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAG 480699 | || | |||||| || ||||||||||| |||||||||||||||||||| |||||| Sbjct 1483880 AGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGT 1483939 Query 480700 CTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTA 480758 ||||||||||| | || | | ||||| || ||||| ||||| || |||||||| Sbjct 1483940 TATCAATAGTATCTGATGACTCTA-CCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTG 1483998 Query 480759 ACGAAAATTTGGA-ACGACATCTT 480781 |||||||| || | || || |||| Sbjct 1483999 ACGAAAATCTGCATACCACCTCTT 1484022 Score = 132 bits (146), Expect = 3e-25 Identities = 137/177 (77%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| |||||| |||||||| |||||||| || |||||||| Sbjct 1484062 TTGTAGTCAGAAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGC 1484121 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||||||||| |||||||||||||||||||| || || |||||||| || Sbjct 1484122 TGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCT 1484181 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | | |||||| || ||||| ||||| || | |||||| || ||||| || Sbjct 1484182 GATGACTCCA-CTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTG 1484237 Score = 132 bits (146), Expect = 3e-25 Identities = 137/177 (77%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| |||||||| ||||| |||||||| ||||||||||| | |||||| Sbjct 1484746 TTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGC 1484805 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| |||||||| ||||||||||| ||||||| |||||||| || Sbjct 1484806 TGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCT 1484865 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | | ||||| || ||||| ||||| || || || ||||| ||||| || Sbjct 1484866 GATGACTCCA-CCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTG 1484921 Score = 118 bits (130), Expect = 7e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| |||||| | |||||| ||||| || || | |||||| Sbjct 1484290 TTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGC 1484349 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| |||||||||||||||||||| || || |||||||| || Sbjct 1484350 TGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCT 1484409 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | | |||||| || ||||| ||||| || | |||||| |||||||| || Sbjct 1484410 GATGACTCCA-CTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTG 1484465 Score = 111 bits (122), Expect = 1e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| |||||| | |||||| ||||| || || | |||||| Sbjct 1484518 TTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGC 1484577 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| |||||||||||||||||||| || || ||||| ||||| Sbjct 1484578 TGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCC 1484637 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | |||||||||||||| ||||| || | ||||| ||||| || || Sbjct 1484638 GACGATTCTACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTG 1484693 >seq2 Length=2396783 Score = 136 bits (150), Expect = 3e-26 Identities = 138/177 (78%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||||| |||||||| ||||||||||| | ||||||| Sbjct 892856 TTGTAGTCAGACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGT 892915 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || |||||||||||||||||||||||||||||||| |||||| || || || || Sbjct 892916 TGGTCAGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCG 892975 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || ||| ||||||||| |||||||| | ||||| |||||||| || Sbjct 892976 GAGGACTCGACTTCCAA-GGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTG 893031 Score = 100 bits (110), Expect = 2e-15 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || || || ||| |||||| | ||| | | ||| ||| Sbjct 267188 ATTGGTATCGATTTGGGTACCACGTACTCTTGTGTCGGTGTGATGAAGTCGGGTCGTGTA 267129 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| |||| |||||||||||||| |||| || || || || ||| ||| |||||| Sbjct 267128 GAAATTCTTGCTAATGACCAAGGTAACAGAATCACTCCTTCCTACGTTAGTTTCACTGAA 267069 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || |||| ||||||||||| | |||||| ||||| || || || Sbjct 267068 GACGAGAGACTGGTTGGTGATGCTGCTAAGAACTTAGCTGCTTCTAACCCAAAAAACACC 267009 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATG 474551 || |||||| ||| |||||||| ||| || | ||||| Sbjct 267008 ATCTTTGATATTAAGAGATTGATCGGTATGAAGTATGATG 266969 Score = 86.0 bits (94), Expect = 4e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785 |||| ||| |||| || |||| |||||||| || || || || ||||||||||||| | Sbjct 266794 AAGTCACTCATGCTGTCGTTACCGTTCCAGCCTACTTCAACGACGCTCAACGTCAAGCCA 266735 Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845 |||| ||||| || || || ||| | | |||| | | ||| | || || || || | Sbjct 266734 CTAAGGATGCCGGTCTCATCGCCGGTTTGACTGTTCTGAGAATTGTGAACGAGCCTACCG 266675 Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | || || |||||||| ||| | || |||| Sbjct 266674 CCGCTGCCCTTGCTTACGGTTTGGACAAGA 266645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178899736036