Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 1e-19
seq2 107 5e-18
seq1 84.2 5e-11
>seq4
Length=1814878
Score = 113 bits (124), Expect = 1e-19
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || || |||||| | |||||||| || |||
Sbjct 1484465 CAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCAGAC 1484406
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || |||||| ||||||||||| || ||||| ||| || ||| |||
Sbjct 1484405 ACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 1484346
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| | |||||||| || ||||| ||||||||||| || ||| | | || |||||| ||
Sbjct 1484345 CGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATC 1484286
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|| || || |||||||| ||| | ||||| |||||
Sbjct 1484285 CAAAAGGAATCTACTCTCCACTTGGTTTTAAGACT 1484251
Score = 98.7 bits (108), Expect = 2e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| ||| | | |||||||| || |||
Sbjct 1484612 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 1484553
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || ||| | | || |||||| |||| || || |||||||| |||
Sbjct 1484552 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCAC 1484493
Query 206374 CTTGTTTTGAGACT 206387
| ||||| |||||
Sbjct 1484492 TTGGTTTTAAGACT 1484479
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || || || || |||||| | |||||||| || |||
Sbjct 1484237 CAGATTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCAGAC 1484178
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || |||||| ||||||||||| || ||||| ||| || || |||
Sbjct 1484177 ACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAA 1484118
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || ||||| |||||||||| || ||| | | || |||||| ||
Sbjct 1484117 CGTCTGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAACATC 1484058
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || || || || ||| | ||| | |||
Sbjct 1484057 CAGAAGGAATCCACCCTCCACTTGGTTCTAAGA 1484025
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| || ||||| || || |||||| | || |||||
Sbjct 1484927 AAAATG---CAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAG 1484871
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|| ||||| | || || || ||||||||||| || ||||| ||| ||
Sbjct 1484870 TCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCT 1484811
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| ||| | | || || || || ||||| ||||||| || || ||| | | |||
Sbjct 1484810 GACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGAT 1484751
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||| |||| || || || || || ||| | ||| | |||
Sbjct 1484750 TACAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGA 1484709
>seq2
Length=2396783
Score = 107 bits (118), Expect = 5e-18
Identities = 161/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 206158 AAGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAA 206217
||| | |||||| ||||| || ||| || | || || || || || || ||||||
Sbjct 893043 AAGACAAAAATG---CAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAA 892987
Query 206218 GTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATT 206277
|| || || ||||| |||| || ||| ||||||||||| || |||||||||
Sbjct 892986 GTCGAGTCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATT 892927
Query 206278 TTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTG 206337
|| ||| ||| | | || || || || ||||| ||||||| || || ||| ||
Sbjct 892926 CCTCCTGACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTG 892867
Query 206338 GCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
| || |||||| ||||||| ||||||||| | ||||| ||| |||||
Sbjct 892866 TCTGACTACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGA 892819
>seq1
Length=2891404
Score = 84.2 bits (92), Expect = 5e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| ||||| || | ||||| || ||||| || | ||| ||| | | ||| || |
Sbjct 1096813 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 1096872
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || ||
Sbjct 1096873 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 1096932
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
| || || || || | || || | ||| |||| || |||||||| | ||| | ||
Sbjct 1096933 AATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAAC 1096992
Query 173287 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 173330
|| |||||| ||| || || || || || |||||||| || ||
Sbjct 1096993 AGGGTCCAATCGCCATTCTGT-TCTACTCTTTTCATGAACAGATC 1097036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820694005447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |