Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 4e-27
seq2 131 2e-25
seq3 105 7e-18
>seq4
Length=1814878
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || |||||||||||||| |||||||| || || || | ||| || || ||
Sbjct 1484721 GTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTG 1484780
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || |||||||| ||||| ||||| || || || || ||||| || |||||||| ||
Sbjct 1484781 CTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTT 1484840
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|||||| || | ||||| || || ||||| || ||||| || || ||||| ||
Sbjct 1484841 GGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGT 1484900
Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTT 134719
|| |||||||| ||||| |||||||| ||
Sbjct 1484901 TAGGGTTTTAACAAAAATCTGCATTTTTTT 1484930
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| || || | ||| || ||||||||||||||||| ||||| || |
Sbjct 1483786 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 1483845
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || || || || || || || |||||||| ||||| || || ||
Sbjct 1483846 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 1483905
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || |||||| || | || || || || || ||
Sbjct 1483906 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 1483965
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || ||||| |||| ||| || |||||||| |||||
Sbjct 1483966 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 1484012
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| || || | ||| || || ||||||||||| ||||||||||| |
Sbjct 1484242 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 1484301
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | || || || || || |||||||| ||||| || || ||
Sbjct 1484302 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 1484361
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || || || ||| | ||||| || || |||||
Sbjct 1484362 ATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACT 1484421
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || ||||| |||||||| || |||||||| |||||
Sbjct 1484422 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 1484468
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || | || | ||| || ||||||||||| || ||||||||||| |
Sbjct 1484014 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 1484073
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || || || || || ||||| |||| ||| |||||||| || ||
Sbjct 1484074 AGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGA 1484133
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || || || ||| | ||||| || || |||||
Sbjct 1484134 ATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACT 1484193
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || ||||| |||||||| || || ||||| |||||
Sbjct 1484194 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 1484240
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| || || | ||| || || ||||||||||| ||||||||||| |
Sbjct 1484470 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 1484529
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | || || || || || |||||||| ||||| || || ||
Sbjct 1484530 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 1484589
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || || || ||| | || || |||||||| ||
Sbjct 1484590 ATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACC 1484649
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || ||||| || || || || ||||| || |||||
Sbjct 1484650 TCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 1484696
>seq2
Length=2396783
Score = 131 bits (144), Expect = 2e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || || || ||||| | || || ||||| || ||||||||||| | |
Sbjct 892808 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 892867
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | | | ||| || || || || || |||||||||||||| || || || || ||
Sbjct 892868 AGAGTTCT-ACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 892926
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || ||||| ||| | |||||||| || || ||
Sbjct 892927 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 892986
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | ||||| || ||||||||||| || || |||||||| ||||||||
Sbjct 892987 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 893037
>seq3
Length=2260675
Score = 105 bits (116), Expect = 7e-18
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575
|| || |||||||| ||||||||||| | ||| | | | | || || | || || ||
Sbjct 1393336 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA-TCCTCCAATTGCTTACC 1393394
Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635
||||| |||| |||||| || || || || || || || || || ||||| || ||
Sbjct 1393395 AGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTT 1393454
Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695
||| ||| | |||||||| || ||||| || | || || || |||||||| | ||
Sbjct 1393455 GACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGT 1393514
Query 134696 TTTAACGAAAATTTGCATTTTG 134717
|| ||||||||||||||||||
Sbjct 1393515 CTTTACGAAAATTTGCATTTTG 1393536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398355777640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |