Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 190 3e-43 seq4 129 7e-25 >seq1 Length=2891404 Score = 190 bits (210), Expect = 3e-43 Identities = 935/1469 (64%), Gaps = 43/1469 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || || Sbjct 1096159 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 1096218 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| ||||| | || | ||| | | ||| | ||| | Sbjct 1096219 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 1096278 Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 ||||| | ||||| || | | | || | || | | ||||| ||| | || | Sbjct 1096279 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 1096336 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 || || || || ||||| || || | || || || || | || || | | || | Sbjct 1096337 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 1096396 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 ||||| | || || | ||||| || || || ||||||||||| || ||| | Sbjct 1096397 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 1096456 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 ||||| || |||||||| | | || || ||||| |||| || | ||||| Sbjct 1096457 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 1096516 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598 | ||||| | | || || | || | |||||| || ||| ||| ||| | |||| Sbjct 1096517 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 1096575 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 |||||||| || ||||||| || || | || || || || || ||||||||||| Sbjct 1096576 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 1096635 Query 118659 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 118712 |||||||| | | | | || |||| || || | ||| | ||||| || Sbjct 1096636 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 1096695 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| ||||| |||| ||||| ||| || ||| || | |||||| | Sbjct 1096696 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAG 1096755 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| || |||||| ||||||||||| || || | ||| ||||||| ||| Sbjct 1096756 CAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCA 1096815 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 ||||| || |||||| |||| || || || || ||||| | || || || || | ||| Sbjct 1096816 TCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAA 1096875 Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | ||| | || ||| || || || || | ||||| || ||| Sbjct 1096876 AGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTA 1096931 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 | | ||||| || || || | | || | || || || || | | ||| |||| Sbjct 1096932 CAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAA 1096991 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 || | ||| | ||| || || || | |||||||| || || |||||||| | || Sbjct 1096992 CAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGC 1097051 Query 119069 CGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 | ||| | || | | | || || || | | || || || ||| | || | | Sbjct 1097052 GGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAATGA 1097110 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185 || | | ||| || || ||||| || |||| ||||| || | || || | |||| Sbjct 1097111 AGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGACGTT 1097167 Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 |||| | |||| ||||| | |||||| ||| || || | | ||||||||| | Sbjct 1097168 TGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAA 1097227 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTG 119299 |||||| || || || || || ||| | || || |||| | | || || Sbjct 1097228 TACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATTATG 1097285 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| |||||| || || || || |||||| || || ||| | | | | | Sbjct 1097286 AATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATC 1097345 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||| || || || || |||||| || | || | | ||| || |||||||| || Sbjct 1097346 GTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGG 1097405 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478 || ||||||||||| || ||||| || | || || |||| |||| | || || Sbjct 1097406 GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATACTTCTGACTCA 1097464 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | || || || || | || | |||||| || || ||||| ||||| | || | Sbjct 1097465 TAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACAC 1097524 Query 119539 GCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAAC- 119595 |||||| || || ||| || ||| || || |||||| | ||| | |||||| Sbjct 1097525 GCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGGTAAGA 1097582 Query 119596 TCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 |||| ||||||||||||| ||||| ||| Sbjct 1097583 TCTT-TCCAAGGTCTTGAATCCAAAGTAG 1097610 >seq4 Length=1814878 Score = 129 bits (142), Expect = 7e-25 Identities = 386/586 (66%), Gaps = 25/586 (4%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| | | | || || ||||| |||||| || |||| Sbjct 438744 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 438803 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| | ||||||||||||||| || | | ||| || || || |||||||| Sbjct 438804 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 438863 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC--- 130191 ||||| ||| ||||| |||| | ||| ||||| || | | | || ||| Sbjct 438864 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAGA 438919 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || Sbjct 438920 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 438979 Query 130251 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 | | || ||| | ||| ||||||||||||||| |||| || || || || Sbjct 438980 GAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTA 439036 Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || ||| || | | | ||| || | ||| | |||| || | |||||| Sbjct 439037 AGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGG 439095 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427 | || |||||| | ||||| | | || ||| ||||| || || || Sbjct 439096 GAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGG 439155 Query 130428 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481 ||||||| || || |||| | | | | |||||| |||||| ||||||| | Sbjct 439156 CAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGAT 439212 Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541 | |||||||| | | |||||| || |||| ||||| ||||||||| | || Sbjct 439213 TATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTT 439272 Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587 |||| ||| || | || ||||| | | | ||||||| ||||| Sbjct 439273 CGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 439318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435145886920