Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 208 9e-49 seq4 104 3e-17 >seq1 Length=2891404 Score = 208 bits (230), Expect = 9e-49 Identities = 789/1225 (64%), Gaps = 21/1225 (2%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 || || | ||||| || || ||||| |||||||| || ||||||| || | || | Sbjct 1097536 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 1097477 Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | || || ||| || | |||| |||| ||| || | || || || || || ||| Sbjct 1097476 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 1097418 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||| || || |||||||| || ||| | | |||| ||| |||||||| Sbjct 1097417 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 1097358 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | || || || | ||| | | ||| ||||| |||||| || ||||| || ||| Sbjct 1097357 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 1097298 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || ||||||| ||| || | | |||| ||| ||| || || || ||| Sbjct 1097297 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 1097238 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || ||||||||||||||||| | | || || ||| ||| || || ||||| | ||| Sbjct 1097237 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 1097178 Query 104588 GCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643 | | || | || | || | | || | || | ||||||||||| || || || Sbjct 1097177 GGT-GGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 1097119 Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702 | | | ||| |||| | ||| ||||| ||| | ||||| | | | || | || Sbjct 1097118 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAGACT 1097060 Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762 | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| ||| Sbjct 1097059 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 1097000 Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822 || | || || | |||| | || ||||| || |||| | | || || || |||| Sbjct 1096999 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 1096940 Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG 104882 | | | ||| || ||||| | |||||||| | | || | ||| Sbjct 1096939 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCCAAA 1096880 Query 104883 ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942 | | ||| | || || || || | ||||| || |||||||| |||| |||||| || | Sbjct 1096879 AGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGTATA 1096820 Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002 | || || |||||| |||| | ||| || ||||| |||||||| || || || || | Sbjct 1096819 AGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACC 1096760 Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062 | || ||||| | |||| | | || ||||| ||||| |||||| | || | Sbjct 1096759 TTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGGCTT 1096700 Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAA 105116 | || ||||| || | ||| || | || || | || || | | ||||| Sbjct 1096699 CTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTGAAA 1096640 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 | || || ||| | || ||| || || ||| | |||||| |||| || ||||||| Sbjct 1096639 AGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAAATT 1096580 Query 105177 TTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||||||||| ||| ||| | | ||| |||||| | | | || || | | | ||| Sbjct 1096579 TTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTGGGT 1096521 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295 ||||| ||| | || |||| || || | | | |||||||| ||||| Sbjct 1096520 GTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCAGAAGCC 1096461 Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355 || | | ||| | || ||||| || || || || || ||| | || || | || Sbjct 1096460 AAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGC--CTCCA 1096403 Query 105356 --GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 105413 || || || | | || || | || |||||||| | ||||||||||| || || | Sbjct 1096402 ACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCTCAGG 1096343 Query 105414 GGGTGCTTCAATTTGATATGTGGGA 105438 | | | |||| ||| ||||||| Sbjct 1096342 GCATTTTGCAATATGACTTGTGGGA 1096318 >seq4 Length=1814878 Score = 104 bits (114), Expect = 3e-17 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || |||| ||||| || | || || || ||||| |||| ||| || | Sbjct 438976 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 438917 Query 94783 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841 | | | || || || ||||| || | | || || || ||||||||||||||| Sbjct 438916 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 438858 Query 94842 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 ||| || || || || ||| |||| | ||| | |||||| ||||||||||||||||| Sbjct 438857 CTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 438799 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | ||||||||| |||||||| | | ||||||||| | ||| || ||||| Sbjct 438798 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 438744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260748964680