Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4 134 9e-27 seq2 116 2e-21 seq3 100 2e-16 >seq4 Length=1814878 Score = 134 bits (148), Expect = 9e-27 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| |||||||| ||||| ||||| ||||| |||| ||||||| Sbjct 1484716 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 1484775 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| |||||||| || ||||| || || | || ||||| ||| Sbjct 1484776 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 1484835 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | ||| || || ||| |||||| |||||| || | || || || || Sbjct 1484836 ATCTTG-GATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTT 1484894 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||| |||| ||||| |||||||||||||| || Sbjct 1484895 ACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 1484927 Score = 125 bits (138), Expect = 4e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || || |||||||| | || ||||| || |||||| ||||||||||| || ||||| Sbjct 1483783 TCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCA 1483842 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 ||||| |||| ||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 1483843 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 1483902 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTC 34655 || | || ||||||||| ||| || | ||| ||| || ||| || ||| ||| Sbjct 1483903 GGAATACCTTCCTTGTCT-TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTC 1483961 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || ||||| |||| || || || ||||||||||| Sbjct 1483962 TACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 1484012 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| |||||||| |||||||| ||||| || || ||| Sbjct 1484242 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 1484301 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| | ||| ||||| || || || ||||| || ||||| || || Sbjct 1484302 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 1484361 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| |||| || | ||| |||||| |||||| Sbjct 1484362 ATACCTTCCTTGTCTTGAATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCAC 1484420 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || ||||| ||||| || || || ||||||||||| Sbjct 1484421 TTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 1484468 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| ||||| || ||||| || || ||||| |||| | ||||| Sbjct 1484032 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 1484091 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| || | ||| || || || || || | || ||||||||| Sbjct 1484092 AGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 1484151 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| |||| || | ||| |||||| ||||||||| | || || || || Sbjct 1484152 ATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTT 1484210 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| || || |||||||||||||| Sbjct 1484211 ACCAGTTAAAGTCTTGACAAAAATCTGCAT 1484240 >seq2 Length=2396783 Score = 116 bits (128), Expect = 2e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || || || |||| ||||||| ||||| ||||| ||||| Sbjct 892843 CTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 892902 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || ||||| |||||||| || || | ||| ||||||||| ||||| | || || Sbjct 892903 AATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGAATCTTG-GACTTGACAT 892961 Query 34635 TAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| ||||||| ||| || || ||||||||||| || || | Sbjct 892962 TGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGA 893021 Query 34694 CAAAAATCTGCATGTT 34709 | ||||||||||| || Sbjct 893022 CGAAAATCTGCATTTT 893037 >seq3 Length=2260675 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | ||| ||||||||| ||||| || || || | |||| | || || Sbjct 1393324 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 1393383 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||| ||||| ||||| || | |||||||||||| || || | |||||||||||| || Sbjct 1393384 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTG 1393442 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || | || ||| | ||| ||||| |||||| |||| ||| || || || Sbjct 1393443 AATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTT 1393502 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 |||||| | || || || ||||| ||||| ||| Sbjct 1393503 ACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 1393536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729573149631