Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 4e-12 >seq4 Length=1814878 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--A 27844 |||||||| |||||||| ||||| || || || || ||| || |||| || || | Sbjct 1484927 AAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCA 1484868 Query 27845 GCACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 || || || | ||| |||||| || || || || |||||| |||| | Sbjct 1484867 TCAGACACTATTGATAAT--GTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTG 1484810 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | |||||||| ||||||||||| || || ||| |||| |||| | | | || |||| Sbjct 1484809 ACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATT 1484750 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 ||||||||||||| || ||| | || |||||| Sbjct 1484749 ACAACATCCAAAAGGAATCCACCCTCCACTTGGTT 1484715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862369640489