Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq4 185 2e-41
seq2 159 7e-34
seq3 156 9e-33
>seq4
Length=1814878
Score = 185 bits (204), Expect = 2e-41
Identities = 156/192 (81%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || ||
Sbjct 1484277 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 1484336
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||||||||| |||||| |||||||| ||||||||||| ||||| | |||||| |
Sbjct 1484337 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTT 1484396
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| || | || ||||| |||||||| |||||||| || |||||||| ||
Sbjct 1484397 GTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGAC 1484456
Query 283088 GAATATCTGCAT 283099
||| ||||||||
Sbjct 1484457 GAAAATCTGCAT 1484468
Score = 176 bits (194), Expect = 9e-39
Identities = 154/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || |||||||||||||||| ||| || | ||||| || ||||| || || |||||
Sbjct 1484049 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAA 1484108
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| |||||| || ||| |||||||| ||||||||||| ||||| | |||||| |
Sbjct 1484109 GATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTT 1484168
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| || | || ||||| |||||||| |||||||| || |||||||| ||
Sbjct 1484169 GTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGAC 1484228
Query 283088 GAATATCTGCAT 283099
|| ||||||||
Sbjct 1484229 AAAAATCTGCAT 1484240
Score = 167 bits (184), Expect = 5e-36
Identities = 152/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || ||
Sbjct 1484505 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 1484564
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||||||||| |||||| |||||||| ||||||||||| ||||| | || ||| |
Sbjct 1484565 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTT 1484624
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || ||||| | ||| || || || || || |||||||| ||||| ||||| ||
Sbjct 1484625 GTCAATGGTATCCGACGATTCTACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGAC 1484684
Query 283088 GAATATCTGCAT 283099
||| ||||||||
Sbjct 1484685 GAAGATCTGCAT 1484696
Score = 165 bits (182), Expect = 2e-35
Identities = 187/250 (75%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 282853 CCTAAAAAATAAAAC---GTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTT 282909
|||||| ||| ||| || |||||| | || | | ||||| || | ||| ||
Sbjct 1483763 CCTAAACAATTGAACAAAGTTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATT 1483822
Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969
| ||||| || ||||| |||| ||| || | || || || ||||| || || || ||||
Sbjct 1483823 CCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGA 1483882
Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029
|||||||||| |||||| |||||||| ||||||||||| ||||| | ||| ||| |||
Sbjct 1483883 TCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTAT 1483942
Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
| ||||| || || | || || || |||||||| |||||||| || | |||||| ||||
Sbjct 1483943 CAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGA 1484002
Query 283090 ATATCTGCAT 283099
| ||||||||
Sbjct 1484003 AAATCTGCAT 1484012
Score = 158 bits (174), Expect = 3e-33
Identities = 152/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| |||||||||||||| |||| ||| || | || || || ||||| || || |||||
Sbjct 1484733 TTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 1484792
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| |||||||| |||||| |||||||| ||||| ||||| ||||| | ||| || |
Sbjct 1484793 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 1484852
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||| |||||||| || | || || || |||||||| |||||||| || | || |||||
Sbjct 1484853 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 1484912
Query 283088 GAATATCTGCATTTT 283102
|| |||||||||||
Sbjct 1484913 AAAAATCTGCATTTT 1484927
Score = 131 bits (144), Expect = 4e-25
Identities = 184/256 (72%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|||||||||||| | || |||| | ||| || || |||| ||| ||||| || || |
Sbjct 118032 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 117973
Query 317007 AGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065
|||| | | | | ||| | | ||||| || || | |||||||| |||| || ||||
Sbjct 117972 AGTTCT-ACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCA 117914
Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125
||| || ||||| |||||||| || || || || |||||||| || | | ||||||
Sbjct 117913 TCAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCA 117854
Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185
| || | || |||||||| | |||||| |||| || ||||| ||||||||||| |
Sbjct 117853 AACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGT 117794
Query 317186 CACACAGGTCCTCGCC 317201
||| || || || ||
Sbjct 117793 TACATAGATCTTCACC 117778
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 301477 CATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536
||||||||| || || | | ||||||| |||| |||| ||||||| || |||||
Sbjct 1530608 CATGGAGAATGCTTTGTCCTGAACGATGGTGGTGAAGTCGATTTGGATCTCGGAAACTAC 1530667
Query 301537 GAACGTTTCACTTCATTAAC-CCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTT 301594
||| | | | ||| || | || ||| | | || || |||| ||||| | || |
Sbjct 1530668 GAAAGAT--ATCTCAATATCACCCTAACCAGAGATCACAACATTACCACTGGTAAGGTCT 1530725
Query 301595 ATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654
||| ||| ||||||||||| ||| | | ||| |||||||||||| || || || ||||
Sbjct 1530726 ATTCAAAGGTTATCGAAAAGGAAAGAAACGGTGACTATCTCGGAAAAACTGTCCAGGTTG 1530785
Query 301655 TTCCCCACATCACCGATG 301672
| || ||| | ||| |||
Sbjct 1530786 TCCCTCACTTAACCAATG 1530803
>seq2
Length=2396783
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || ||||| || || || || || ||||||||||||||||
Sbjct 892807 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 892866
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | || || || ||||| || || ||||| |||||||||||||||||| ||
Sbjct 892867 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 892926
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||||||||| ||||| | || || | ||||| ||||| || | |||||
Sbjct 892927 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 892986
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| | || || |||||||| || || ||||| ||||| |||||||||||
Sbjct 892987 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 893037
>seq3
Length=2260675
Score = 156 bits (172), Expect = 9e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | ||| |||| || || || || |||||||||||||||||||
Sbjct 1393305 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 1393364
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | |||||||| | ||| || || |||||||||| ||| ||||||||| ||
Sbjct 1393365 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 1393424
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | || |||||||| |||| || ||
Sbjct 1393425 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 1393484
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||||| |||||||| || | ||||| ||||| || ||||||||
Sbjct 1393485 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 1393535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739106120578
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