Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 172 6e-38 >seq1 Length=762788 Score = 172 bits (190), Expect = 6e-38 Identities = 470/707 (66%), Gaps = 12/707 (2%) Strand=Plus/Plus Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753 |||||||| ||||| || || || | | ||| || || ||||| ||||| || || || Sbjct 618946 TTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATAAAATCGAATGGGTTC 619005 Query 16754 GTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812 ||| | | ||||| ||| || | || || | | | | ||| || || |||||||| Sbjct 619006 GTAACGTTGAAATACTTTTGATTGCCA-AGAGCAACTAGCAGTCTGTCGGCAACAAATTC 619064 Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872 | ||||||| ||||| ||| |||||| || | || || || || || || | Sbjct 619065 AACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAGGGACACTGGTAGGGCATCGAT 619124 Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAAC--TCGTTCC-TC 16929 ||| ||| | || || | || || || |||| || || |||| || || || Sbjct 619125 GAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGATTCTCTCAACAATCTTTGGATC 619184 Query 16930 GGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTC 16989 | | ||| | || ||| || ||| | |||||||| ||||| || | ||||| Sbjct 619185 AGGCT-TGT-TCTTCAAG-TGCGCAAATAGAAGACATGCAAAATCAGTGTGAAGACCCTC 619241 Query 16990 GTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAA 17049 |||||||| || || || ||||| || || | ||||||||| ||| ||||||| Sbjct 619242 GTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCATCAAACCTTTCTTCTTTAG 619301 Query 17050 CCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGAT 17109 ||| || || ||||| || || || || ||||| | ||| || |||| ||||| |||| Sbjct 619302 CCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTTCCACGGCAGCAAAGGCGAC 619361 Query 17110 TAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT 17169 |||| || || | || |||| || | |||||| | |||| ||||| || Sbjct 619362 CAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCATCTGATGGCCCATTCGGCCTT 619421 Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTC 17229 | ||| || | || |||| ||||| || |||| || | |||| |||| Sbjct 619422 CTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAGGAAATCGCTCTCCTTGGGGTC 619481 Query 17230 GATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTAT 17289 | || || || || || || || ||| | |||||||| ||||| ||||| || Sbjct 619482 TTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAGTGGATGTTTTCCATCATGAT 619541 Query 17290 CTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC-CG 17348 ||| || ||||||||||| |||||| | ||||||||||| | |||| |||| || Sbjct 619542 CTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACTTCGGCTGAGAA--GTTCTCG 619599 Query 17349 -CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394 | | || ||||| || || |||||| ||| || || || ||||| Sbjct 619600 ACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAATGCCAA 619646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545548245440