Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 6e-38
>seq1
Length=762788
Score = 172 bits (190), Expect = 6e-38
Identities = 470/707 (66%), Gaps = 12/707 (2%)
Strand=Plus/Plus
Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753
|||||||| ||||| || || || | | ||| || || ||||| ||||| || || ||
Sbjct 618946 TTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATAAAATCGAATGGGTTC 619005
Query 16754 GTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812
||| | | ||||| ||| || | || || | | | | ||| || || ||||||||
Sbjct 619006 GTAACGTTGAAATACTTTTGATTGCCA-AGAGCAACTAGCAGTCTGTCGGCAACAAATTC 619064
Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872
| ||||||| ||||| ||| |||||| || | || || || || || || |
Sbjct 619065 AACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAGGGACACTGGTAGGGCATCGAT 619124
Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAAC--TCGTTCC-TC 16929
||| ||| | || || | || || || |||| || || |||| || || ||
Sbjct 619125 GAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGATTCTCTCAACAATCTTTGGATC 619184
Query 16930 GGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTC 16989
| | ||| | || ||| || ||| | |||||||| ||||| || | |||||
Sbjct 619185 AGGCT-TGT-TCTTCAAG-TGCGCAAATAGAAGACATGCAAAATCAGTGTGAAGACCCTC 619241
Query 16990 GTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAA 17049
|||||||| || || || ||||| || || | ||||||||| ||| |||||||
Sbjct 619242 GTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCATCAAACCTTTCTTCTTTAG 619301
Query 17050 CCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGAT 17109
||| || || ||||| || || || || ||||| | ||| || |||| ||||| ||||
Sbjct 619302 CCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTTCCACGGCAGCAAAGGCGAC 619361
Query 17110 TAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT 17169
|||| || || | || |||| || | |||||| | |||| ||||| ||
Sbjct 619362 CAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCATCTGATGGCCCATTCGGCCTT 619421
Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTC 17229
| ||| || | || |||| ||||| || |||| || | |||| ||||
Sbjct 619422 CTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAGGAAATCGCTCTCCTTGGGGTC 619481
Query 17230 GATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTAT 17289
| || || || || || || || ||| | |||||||| ||||| ||||| ||
Sbjct 619482 TTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAGTGGATGTTTTCCATCATGAT 619541
Query 17290 CTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC-CG 17348
||| || ||||||||||| |||||| | ||||||||||| | |||| |||| ||
Sbjct 619542 CTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACTTCGGCTGAGAA--GTTCTCG 619599
Query 17349 -CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394
| | || ||||| || || |||||| ||| || || || |||||
Sbjct 619600 ACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAATGCCAA 619646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545548245440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |