Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 2e-56
seq1 134 2e-26
seq7 98.7 1e-15
>seq2
Length=1086951
Score = 233 bits (258), Expect = 2e-56
Identities = 700/1071 (65%), Gaps = 16/1071 (1%)
Strand=Plus/Plus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
|||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| |
Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
||||||| ||||| ||||| |||| | ||||| ||| || | ||| | |||| |
Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGCTTCTGAGCTT 390392
Query 53901 TTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCAAACTC 53958
| || | ||| || | | ||||| | ||| || ||| || ||| || ||
Sbjct 390393 TGATAGTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTC 390450
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
|| || | |||| | | | || ||| |||| || | | ||| | ||| || ||
Sbjct 390451 ATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACC 390510
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078
|| || | |||| ||||| || | ||| |||| ||| ||||| || | ||||||
Sbjct 390511 GTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCT 390570
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCA 54136
|| | ||| || || || || | |||| ||| ||| || | | ||||||
Sbjct 390571 GGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCA 390628
Query 54137 GAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 54196
|| ||||| ||||| ||||| || | | | | || || | ||||| || || |||||
Sbjct 390629 GAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCA 390688
Query 54197 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCA 54256
| ||| | ||| ||||| || || || | | ||| || ||||||||||| || | |||
Sbjct 390689 ACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCG 390748
Query 54257 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCC 54316
||||| || | || ||| || | | |||||| || || | || || ||
Sbjct 390749 TTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCG 390808
Query 54317 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 54376
|| || | || ||||| | || ||| ||| || ||||| ||||| || || ||
Sbjct 390809 CCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAG 390868
Query 54377 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 54436
|| || ||||| | || |||||| |||||| || || || ||| || || ||
Sbjct 390869 TCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTG 390928
Query 54437 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATA 54496
||||| || || || ||||| || || || || ||| | |||||||| || ||||
Sbjct 390929 AATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGC 390988
Query 54497 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 54556
|| || || || | || || || || || |||||||| | || ||||||||
Sbjct 390989 ACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGA 391048
Query 54557 CTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCA 54616
| ||| ||| || | || || ||||| || ||| | || || ||||||
Sbjct 391049 CGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCA 391108
Query 54617 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATAT 54676
|||||||||||| ||||||| ||||| | |||| | |||||||| | ||| || |
Sbjct 391109 AAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGC 391168
Query 54677 TTGTTAACTACATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTT 54732
| | || | ||| |||| | ||| ||||| || || || || | ||||||||
Sbjct 391169 TCCATGAC-AATTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTT 391224
Query 54733 AGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTT 54792
||| || ||||||| | ||||| ||| ||| | ||| | || | |||| ||
Sbjct 391225 AGGGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTT 391284
Query 54793 GTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
|| || || || | || | ||||||||||| | ||||| || || ||
Sbjct 391285 ATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 134 bits (148), Expect = 2e-26
Identities = 478/732 (65%), Gaps = 15/732 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| ||| | |||||||| || || || ||||| | || || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATT-CAGAAAT 23962
||||| |||||| |||| || ||||| || | || ||||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTGAA-ATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
|| ||| || || ||||| || | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
||||| || || | | | | || |||| ||| || ||| || || || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 24082 TAGATCTTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140
| ||| | | || || || | | || || ||| | | ||||||
Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221
Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200
||||| ||| |||||||||||||| | ||||| || || || ||||| || ||||||
Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281
Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260
|| | || ||| || ||||| || || | ||||| ||||| || ||||||| |||
Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341
Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCGGCGCT--GTCATGTATCCA- 24316
|| || || |||||||| | | ||| ||| || | | | | || ||| || |||||
Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401
Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
|| || ||||| |||||||||| || | ||| || | || || ||||| || ||
Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460
Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436
| | | || || ||||| | || || ||||||| ||| || | || ||
Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520
Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496
|| |||||||| || || || || ||||| || || | || || | || || ||
Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580
Query 24497 TTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554
||| | || ||||| | || || || || || || ||||| || |||||
Sbjct 619581 TTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638
Query 24555 AACGCCAATACA 24566
|| ||||| |||
Sbjct 619639 AATGCCAACACA 619650
>seq7
Length=1626734
Score = 98.7 bits (108), Expect = 1e-15
Identities = 539/846 (64%), Gaps = 36/846 (4%)
Strand=Plus/Plus
Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGGATA 53508
||||| || |||||||| | ||||| || | | | ||| || | || ||||||
Sbjct 861460 TAAATCGTCTCGAAGATTTGTTTATTGAG-TATCGATGCCTCTATAGATTCGAATGGAAT 861518
Query 53509 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 53568
|| || | || ||| || ||||||||||| |||||||| | | |||||||| |||
Sbjct 861519 CTTCAAAATCATGAACAAATCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCT 861578
Query 53569 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 53628
| | || | |||||||||| || |||||| | | |||||| || | | |
Sbjct 861579 CATGTTGCTGTATTCAGCTTCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAA 861638
Query 53629 GTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TTG------- 53679
||||| || | || || |||| | || | |||||||| |||
Sbjct 861639 ATTTCTCGTAACAAGCTTTACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGT 861698
Query 53680 ----TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735
|| |||| | ||||| | | |||| ||||| ||||| || || |||| ||
Sbjct 861699 ACCTTCGATCT-TCACAAAACTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCT 861757
Query 53736 CATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 53794
||| | | || ||||| | ||||| ||| || || |||| || || ||
Sbjct 861758 CATCTGG-TGAGCTGTATTGAACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCG 861816
Query 53795 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854
| |||| |||||| ||||| || || | ||||||||| || ||||| || ||
Sbjct 861817 AGGTTTTTTTGATTTGATTTTTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCG 861876
Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA--GATT 53912
|| |||| || || || ||| | |||| | | | ||||| | | | ||
Sbjct 861877 GTCTCAACTTGACTTTGTAAAATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACC 861936
Query 53913 TGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCA--AAC 53970
||||| ||| || | || | ||| |||| ||| ||||| || || | ||
Sbjct 861937 GGTATCAACTTTTGCT--CATAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAAT 861994
Query 53971 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTC 54028
|||| || ||||| ||| ||||| | | || ||| || ||| | | || ||
Sbjct 861995 CTTGT--AAACCAGGTGCTTCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCA 862050
Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 54087
|| || |||||||| | ||||||||||| ||||| ||| || ||||| | | |||
Sbjct 862051 ACGCGCTTCATAAATAAGTCAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAA 862109
Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147
||| || ||||| ||||| ||| | | || | | ||| ||| ||||||| ||
Sbjct 862110 TTCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGG 862169
Query 54148 TTCCAAGTATATGGTCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205
|| | ||||||| || || | || |||| || || || || ||||| | ||| | |
Sbjct 862170 CTCTAGGTATATG--CAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGA 862227
Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265
|| ||||| || |||| | | ||| |||| | |||||| || | ||||| | ||
Sbjct 862228 GCTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCT 862287
Query 54266 GAGATA 54271
|| |||
Sbjct 862288 GAAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721540627840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |