Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 233 2e-56 seq1 134 2e-26 seq7 98.7 1e-15 >seq2 Length=1086951 Score = 233 bits (258), Expect = 2e-56 Identities = 700/1071 (65%), Gaps = 16/1071 (1%) Strand=Plus/Plus Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840 |||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| | Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332 Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900 ||||||| ||||| ||||| |||| | ||||| ||| || | ||| | |||| | Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGCTTCTGAGCTT 390392 Query 53901 TTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCAAACTC 53958 | || | ||| || | | ||||| | ||| || ||| || ||| || || Sbjct 390393 TGATAGTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTC 390450 Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018 || || | |||| | | | || ||| |||| || | | ||| | ||| || || Sbjct 390451 ATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACC 390510 Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078 || || | |||| ||||| || | ||| |||| ||| ||||| || | |||||| Sbjct 390511 GTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCT 390570 Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCA 54136 || | ||| || || || || | |||| ||| ||| || | | |||||| Sbjct 390571 GGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCA 390628 Query 54137 GAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 54196 || ||||| ||||| ||||| || | | | | || || | ||||| || || ||||| Sbjct 390629 GAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCA 390688 Query 54197 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCA 54256 | ||| | ||| ||||| || || || | | ||| || ||||||||||| || | ||| Sbjct 390689 ACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCG 390748 Query 54257 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCC 54316 ||||| || | || ||| || | | |||||| || || | || || || Sbjct 390749 TTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCG 390808 Query 54317 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 54376 || || | || ||||| | || ||| ||| || ||||| ||||| || || || Sbjct 390809 CCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAG 390868 Query 54377 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 54436 || || ||||| | || |||||| |||||| || || || ||| || || || Sbjct 390869 TCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTG 390928 Query 54437 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATA 54496 ||||| || || || ||||| || || || || ||| | |||||||| || |||| Sbjct 390929 AATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGC 390988 Query 54497 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 54556 || || || || | || || || || || |||||||| | || |||||||| Sbjct 390989 ACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGA 391048 Query 54557 CTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCA 54616 | ||| ||| || | || || ||||| || ||| | || || |||||| Sbjct 391049 CGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCA 391108 Query 54617 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATAT 54676 |||||||||||| ||||||| ||||| | |||| | |||||||| | ||| || | Sbjct 391109 AAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGC 391168 Query 54677 TTGTTAACTACATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTT 54732 | | || | ||| |||| | ||| ||||| || || || || | |||||||| Sbjct 391169 TCCATGAC-AATTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTT 391224 Query 54733 AGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTT 54792 ||| || ||||||| | ||||| ||| ||| | ||| | || | |||| || Sbjct 391225 AGGGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTT 391284 Query 54793 GTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 || || || || | || | ||||||||||| | ||||| || || || Sbjct 391285 ATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq1 Length=762788 Score = 134 bits (148), Expect = 2e-26 Identities = 478/732 (65%), Gaps = 15/732 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||| ||| | |||||||| || || || ||||| | || || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATT-CAGAAAT 23962 ||||| |||||| |||| || ||||| || | || ||||| | | |||| || | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTGAA-ATACTTTTGATTGCCAAGAGCAACTAG 619043 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 || ||| || || ||||| || | |||| ||||| | || ||||| || | || Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 ||||| || || | | | | || |||| ||| || ||| || || || || | Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162 Query 24082 TAGATCTTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 | ||| | | || || || | | || || ||| | | |||||| Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 ||||| ||| |||||||||||||| | ||||| || || || ||||| || |||||| Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 || | || ||| || ||||| || || | ||||| ||||| || ||||||| ||| Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341 Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCGGCGCT--GTCATGTATCCA- 24316 || || || |||||||| | | ||| ||| || | | | | || ||| || ||||| Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 || || ||||| |||||||||| || | ||| || | || || ||||| || || Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 | | | || || ||||| | || || ||||||| ||| || | || || Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 || |||||||| || || || || ||||| || || | || || | || || || Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580 Query 24497 TTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 ||| | || ||||| | || || || || || || ||||| || ||||| Sbjct 619581 TTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638 Query 24555 AACGCCAATACA 24566 || ||||| ||| Sbjct 619639 AATGCCAACACA 619650 >seq7 Length=1626734 Score = 98.7 bits (108), Expect = 1e-15 Identities = 539/846 (64%), Gaps = 36/846 (4%) Strand=Plus/Plus Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGGATA 53508 ||||| || |||||||| | ||||| || | | | ||| || | || |||||| Sbjct 861460 TAAATCGTCTCGAAGATTTGTTTATTGAG-TATCGATGCCTCTATAGATTCGAATGGAAT 861518 Query 53509 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 53568 || || | || ||| || ||||||||||| |||||||| | | |||||||| ||| Sbjct 861519 CTTCAAAATCATGAACAAATCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCT 861578 Query 53569 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 53628 | | || | |||||||||| || |||||| | | |||||| || | | | Sbjct 861579 CATGTTGCTGTATTCAGCTTCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAA 861638 Query 53629 GTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TTG------- 53679 ||||| || | || || |||| | || | |||||||| ||| Sbjct 861639 ATTTCTCGTAACAAGCTTTACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGT 861698 Query 53680 ----TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 || |||| | ||||| | | |||| ||||| ||||| || || |||| || Sbjct 861699 ACCTTCGATCT-TCACAAAACTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCT 861757 Query 53736 CATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 53794 ||| | | || ||||| | ||||| ||| || || |||| || || || Sbjct 861758 CATCTGG-TGAGCTGTATTGAACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCG 861816 Query 53795 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854 | |||| |||||| ||||| || || | ||||||||| || ||||| || || Sbjct 861817 AGGTTTTTTTGATTTGATTTTTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCG 861876 Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA--GATT 53912 || |||| || || || ||| | |||| | | | ||||| | | | || Sbjct 861877 GTCTCAACTTGACTTTGTAAAATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACC 861936 Query 53913 TGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCA--AAC 53970 ||||| ||| || | || | ||| |||| ||| ||||| || || | || Sbjct 861937 GGTATCAACTTTTGCT--CATAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAAT 861994 Query 53971 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTC 54028 |||| || ||||| ||| ||||| | | || ||| || ||| | | || || Sbjct 861995 CTTGT--AAACCAGGTGCTTCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCA 862050 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 54087 || || |||||||| | ||||||||||| ||||| ||| || ||||| | | ||| Sbjct 862051 ACGCGCTTCATAAATAAGTCAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAA 862109 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 ||| || ||||| ||||| ||| | | || | | ||| ||| ||||||| || Sbjct 862110 TTCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGG 862169 Query 54148 TTCCAAGTATATGGTCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205 || | ||||||| || || | || |||| || || || || ||||| | ||| | | Sbjct 862170 CTCTAGGTATATG--CAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGA 862227 Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265 || ||||| || |||| | | ||| |||| | |||||| || | ||||| | || Sbjct 862228 GCTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCT 862287 Query 54266 GAGATA 54271 || ||| Sbjct 862288 GAAATA 862293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721540627840