Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 8e-16
seq4 98.7 8e-16
seq8 87.8 1e-12
>seq6
Length=1504611
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25050 AAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGAT 25109
|| || ||||| || || |||||||| ||| ||| | |||| || | | | |
Sbjct 86088 AAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATTGACAAC 86147
Query 25110 CTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTT 25169
||||| || ||| || || |||||| | || || ||||||||| | ||||||
Sbjct 86148 GTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTT 86207
Query 25170 GCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCT 25229
|| || || |||||||||||| || ||| || | || ||||| |||||||||||||||
Sbjct 86208 GCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCT 86267
Query 25230 ACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| | ||| |||| || |||| |||| ||
Sbjct 86268 ACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 86299
>seq4
Length=1192607
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || ||||| || || || |||||| ||| ||| || |
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || |||| || ||| || || |||||| | || || ||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || || || || || |||||||| ||| || |||| | | |||||||||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||||||||| | ||| |||| ||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTT 499286
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
||||||||| || ||| |||| || || || ||||| ||||| || || ||| |
Sbjct 498615 AAAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATC 498674
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
| | || || | | | | |||| || || ||||| |||||| | || ||
Sbjct 498675 CTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGA 498734
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210
|||||||||| | || || || || || || ||||| ||| || |||| | | |||||
Sbjct 498735 TCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTA 498794
Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||||||||||||| | ||| |||| ||
Sbjct 498795 CAATATTCAAAAGGAATCTACCTTACACCTGGTTTT 498830
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || | || || || ||||| ||| ||| ||| || |
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | | ||| || ||| || || |||||| | || || ||
Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || || || || || |||||||| ||| || |||| | | |||||||||
Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||||||||||||||| | ||| |||| || ||||| |||| ||
Sbjct 499939 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATTAAGAGGTGG 499985
>seq8
Length=1564113
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
|| ||||||||| | |||||||| || || |||||||||||| || |||| || | ||
Sbjct 561118 GACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGAC 561059
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || |||||||| ||||| | ||| |||| || |||| |||| ||
Sbjct 561058 TACAACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 561006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796759947312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |