Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 1e-45
>seq1
Length=762788
Score = 197 bits (218), Expect = 1e-45
Identities = 427/633 (67%), Gaps = 17/633 (3%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||| ||||| |||||| ||| | |||||| | |||||||| | |||| ||
Sbjct 619832 GAGCCGTTGCTGGTGGAGAACAAGCGCAGATTCGTGTTGTTCCCCATCAAGTACCACGAG 619773
Query 116636 ATGTGGC--GCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACC 116693
|| |||| |||| |||| || ||||||||||||||||||| ||||||| | ||
Sbjct 619772 ATTTGGCAAGCAT--ACAAGCGCGCTGAGGCGTCGTTCTGGACCGCCGAGGAGATCGATT 619715
Query 116694 TGTCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCA 116750
|||||||||| | ||||||| | ||| ||||||| |||| || ||| ||
Sbjct 619714 TGTCCAAGGATATTCACGACTGGAACAACCGCATGAACGAGCACGAACGTTTCTTCCTCT 619655
Query 116751 AGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810
|| ||| |||| || || || || |||||| || ||||||||||| ||||||||
Sbjct 619654 CGCGTGTGTTGGCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGA 619595
Query 116811 GTTTCGCTCAG--GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGC 116868
|| ||||| || || || | | || || |||||| ||||| || ||||||
Sbjct 619594 ACTT--CTCAGCCGAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCAT 619537
Query 116869 CATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTC 116928
||||| ||| | ||||| || | || || || || ||||| ||| | |
Sbjct 619536 GATGGAAAACATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCC 619477
Query 116929 GGAGGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA 116985
|||||| | ||| | || || ||||| || | || || |||| |||||
Sbjct 619476 CAAGGAGAGCGATTTCC---TATTCAATGCCATTGAAAATATTCCTCAGATCAAGGAGAA 619420
Query 116986 GGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045
|||||| ||||| | | |||||| | | ||||||| || | ||| | ||||
Sbjct 619419 GGCCGAATGGGCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGT 619360
Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105
||||| || ||||| || || || ||||| || || || ||||| || || |||||
Sbjct 619359 CGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCT 619300
Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165
||||| || | |||||||| || || ||| || ||||| || | ||| |||||
Sbjct 619299 AAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGA 619240
Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTT 117198
|||||| || || ||||| ||| | || ||
Sbjct 619239 GGGTCTTCACACTGATTTTGCATGTCTTCTATT 619207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219148478080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |