Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 >seq1 Length=762788 Score = 197 bits (218), Expect = 1e-45 Identities = 427/633 (67%), Gaps = 17/633 (3%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| ||||| |||||| ||| | |||||| | |||||||| | |||| || Sbjct 619832 GAGCCGTTGCTGGTGGAGAACAAGCGCAGATTCGTGTTGTTCCCCATCAAGTACCACGAG 619773 Query 116636 ATGTGGC--GCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACC 116693 || |||| |||| |||| || ||||||||||||||||||| ||||||| | || Sbjct 619772 ATTTGGCAAGCAT--ACAAGCGCGCTGAGGCGTCGTTCTGGACCGCCGAGGAGATCGATT 619715 Query 116694 TGTCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCA 116750 |||||||||| | ||||||| | ||| ||||||| |||| || ||| || Sbjct 619714 TGTCCAAGGATATTCACGACTGGAACAACCGCATGAACGAGCACGAACGTTTCTTCCTCT 619655 Query 116751 AGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810 || ||| |||| || || || || |||||| || ||||||||||| |||||||| Sbjct 619654 CGCGTGTGTTGGCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGA 619595 Query 116811 GTTTCGCTCAG--GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGC 116868 || ||||| || || || | | || || |||||| ||||| || |||||| Sbjct 619594 ACTT--CTCAGCCGAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCAT 619537 Query 116869 CATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTC 116928 ||||| ||| | ||||| || | || || || || ||||| ||| | | Sbjct 619536 GATGGAAAACATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCC 619477 Query 116929 GGAGGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA 116985 |||||| | ||| | || || ||||| || | || || |||| ||||| Sbjct 619476 CAAGGAGAGCGATTTCC---TATTCAATGCCATTGAAAATATTCCTCAGATCAAGGAGAA 619420 Query 116986 GGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045 |||||| ||||| | | |||||| | | ||||||| || | ||| | |||| Sbjct 619419 GGCCGAATGGGCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGT 619360 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 ||||| || ||||| || || || ||||| || || || ||||| || || ||||| Sbjct 619359 CGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCT 619300 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 ||||| || | |||||||| || || ||| || ||||| || | ||| ||||| Sbjct 619299 AAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGA 619240 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTT 117198 |||||| || || ||||| ||| | || || Sbjct 619239 GGGTCTTCACACTGATTTTGCATGTCTTCTATT 619207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219148478080