Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 9e-25
>seq4
Length=1192607
Score = 129 bits (142), Expect = 9e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | ||||| |||| ||||| || || ||| | ||| ||||| |
Sbjct 498618 AATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTC 498677
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||| || || | ||| || || || ||||| |||||||| |||||||||||
Sbjct 498678 TGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCA 498737
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | ||||| || || || || || |||||| | |||| | ||||| ||
Sbjct 498738 ACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAA 498797
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||||||| ||||| || || || ||||||| | || ||||||||||
Sbjct 498798 TATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGGTGGTAT 498848
Score = 122 bits (134), Expect = 1e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | ||||| || ||||| || | || | ||| | |
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | ||| || |||||||| || |||||||| |||||||| ||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | ||||| || || || ||||| |||||| | |||| | ||||| |||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| ||||| || || || |||||||| | || ||||||||||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGGCTAAGAGGTGGTAT 499304
Score = 122 bits (134), Expect = 1e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| ||||| || || ||||| ||| | ||| |||| | |
Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || || | ||| || |||||||| || |||||||| ||||| || |||
Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | ||||| || || || ||||| |||||| | |||| | || || ||
Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| || || ||||| ||||||||||| | || ||||||||||
Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGGTAT 499532
Score = 116 bits (128), Expect = 6e-21
Identities = 167/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| ||||| || || || || || | || | ||| | |
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || || |||||||| || |||||||| |||||||| ||
Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | ||||| || || || ||||| |||||| | |||| | ||||| |||
Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT-ATTAA 124771
|||||||| ||||| || || || |||||||| | ||| |||||||| |||||
Sbjct 499939 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATTAAGAGGTGGTAATTAA 499992
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| ||||| || || || || || | || | ||| | |
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | ||| || || || ||||| |||||||| |||||||| ||
Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || ||||| || || || || || |||||| | |||| | || || ||
Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| || || ||||| ||||||||||| | || ||||||||||
Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGGTAT 499076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455924454400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |