Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 9e-16 seq8 87.8 2e-12 >seq4 Length=1192607 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || |||||| |||||||||| || ||||| ||||| |||||||| || Sbjct 499759 TACCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAG 499700 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | |||||| | ||| || || ||| | || || | ||||| || || | Sbjct 499699 AAAGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTG 499640 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| ||| || |||||| | || | ||||| | ||| | Sbjct 499639 GGATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAA 499580 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||| | ||| || || ||||||||||| Sbjct 499579 CCTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||||| |||||||| | ||||| || |||||||| |||||||| Sbjct 499303 TACCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAG 499244 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | |||||| | || || || ||| | || | | ||||| || || | Sbjct 499243 AAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTG 499184 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| ||| || ||| || | |||| ||| || | | |||| Sbjct 499183 GAATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGA 499124 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || |||| ||| || || ||||||||||| Sbjct 499123 CTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||||| |||| ||| | ||||| || |||||||| |||||||| Sbjct 498847 TACCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAG 498788 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | |||||| | ||| || |||||| | || | | || ||||| || | Sbjct 498787 AAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTG 498728 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| || || || ||| || | |||| ||| || | | || | Sbjct 498727 GAATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAA 498668 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || |||||||| | ||| || || ||||||||||| Sbjct 498667 CCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619 >seq8 Length=1564113 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||||||| |||||||| | |||||||| ||||| |||||||| || || ||| | Sbjct 561015 AATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTG 561074 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||| || | || || ||||| |||| | | || || || || || || |||||| Sbjct 561075 CCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCC 561134 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| || || || || | |||| ||||| | |||||| || | ||| Sbjct 561135 TTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTA 561194 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || ||||| | || || |||||||| ||||| Sbjct 561195 ATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830357701536