Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 4e-18
>seq4
Length=1192607
Score = 105 bits (116), Expect = 4e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
|| |||| |||| ||||||||| || || || ||||||||||| || ||| | |
Sbjct 499064 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499005
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || ||||||||||| || |||||||| || | |||||||| || | | |||
Sbjct 499004 CCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCC 498945
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
|| || ||||| || | | | | || | ||| | |||||||| |||| |||
Sbjct 498944 TTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTG 498885
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||| ||||| || || |||||||||||
Sbjct 498884 ATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| |||| |||||| ||| ||| || || || ||||| || || || | | |
Sbjct 499973 CTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCA 499914
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| ||||| || |||||||| | | |||||||| || | | ||||||
Sbjct 499913 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 499854
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | | | | || | ||| | |||||||| |||| ||||||
Sbjct 499853 TCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATG 499794
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| ||||| || || |||||||||||
Sbjct 499793 GTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| || || ||||||||||| || ||| | | | || ||||||||||| || ||||||
Sbjct 499721 TCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAA 499662
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || | |||||||| || | | |||||||| ||||| || | | |
Sbjct 499661 ATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTG 499602
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
|||||| || | || || || |||| |||||||| || ||||| | ||| || ||
Sbjct 499601 TCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACG 499542
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 499541 AAAATCTGCAT 499531
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
|| |||| |||| ||||||||| || || || ||||||||||| || ||| | |
Sbjct 499520 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTG 499461
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || ||||| ||||| || |||||||| | | || ||||| || | | |||
Sbjct 499460 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 499401
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
||||| ||||| || | | | |||||| || | || || || |||| ||
Sbjct 499400 TTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTA 499341
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || ||||| ||||| || || |||||||||||
Sbjct 499340 ATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071968500480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |