Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 4e-26
>seq1
Length=762788
Score = 132 bits (146), Expect = 4e-26
Identities = 475/731 (65%), Gaps = 24/731 (3%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| ||||||||||| ||||| || || || || | || ||||| |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-----AATAGTATTTATCGCATCCCAATTCCA 16058
||||||||||| || || || | ||| |||| | || || || ||| ||
Sbjct 618985 TCCATAAAATCGAATGGGTTCGT--AACGTTGAAATACTTTTGATTGC----CAAGAGCA 619038
Query 16059 ACAATAA-TCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCT 16117
|| | | ||| || || |||||||| | ||| || ||||||| || |||||| ||
Sbjct 619039 ACTAGCAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCA 619098
Query 16118 ATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATG 16177
| || || || | || || | ||| | | ||||| || | || || ||| |
Sbjct 619099 AGTAGGGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTA 619158
Query 16178 ATTATATCTCTTACTACACTATTTAACGGAGGGTT--TAAT-AAGTGTTTAAACATTATA 16234
|| || ||||| | ||| | ||| ||| || | | ||||| ||| | | |
Sbjct 619159 ATGAT-TCTCTCA--ACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGA 619215
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
|| ||||||||| || | || ||||| || | |||| ||| || || || || |||
Sbjct 619216 CATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGA 619275
Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354
|| ||||| | ||| || || | ||| || ||||||||||| || || || |||||
Sbjct 619276 CCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAA 619335
Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC--GTACGTTCTAtttttacttt 16412
| |||||| || || ||||| || ||||||| ||| | || | || || | | |
Sbjct 619336 ACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCC--T 619393
Query 16413 ctatccattttttagcccaatttg-ctttttgtttAACACAGTTCATGTTCTCTATTGCA 16471
|||||| | | ||||| | | ||| | || | | || || || || || |||
Sbjct 619394 GGATCCATCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAG-GAATATTTTCAATGGCA 619452
Query 16472 TTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATAC 16531
|| |||| ||| | || ||| ||| || || || || || || | | ||
Sbjct 619453 TTGAATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAG 619512
Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGAT 16591
| || || || || || ||||| ||||| || || |||||||| | ||||| |
Sbjct 619513 GTCTCGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGG 619572
Query 16592 ATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCT 16651
||||| ||||| | | || | || | ||||| ||||| || || || ||| ||
Sbjct 619573 ATTTGAACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCA 619632
Query 16652 GCAAAAAACGC 16662
||||| || ||
Sbjct 619633 GCAAAGAATGC 619643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511953748800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |