Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 >seq1 Length=762788 Score = 132 bits (146), Expect = 4e-26 Identities = 475/731 (65%), Gaps = 24/731 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| ||||||||||| ||||| || || || || | || ||||| ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-----AATAGTATTTATCGCATCCCAATTCCA 16058 ||||||||||| || || || | ||| |||| | || || || ||| || Sbjct 618985 TCCATAAAATCGAATGGGTTCGT--AACGTTGAAATACTTTTGATTGC----CAAGAGCA 619038 Query 16059 ACAATAA-TCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCT 16117 || | | ||| || || |||||||| | ||| || ||||||| || |||||| || Sbjct 619039 ACTAGCAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCA 619098 Query 16118 ATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATG 16177 | || || || | || || | ||| | | ||||| || | || || ||| | Sbjct 619099 AGTAGGGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTA 619158 Query 16178 ATTATATCTCTTACTACACTATTTAACGGAGGGTT--TAAT-AAGTGTTTAAACATTATA 16234 || || ||||| | ||| | ||| ||| || | | ||||| ||| | | | Sbjct 619159 ATGAT-TCTCTCA--ACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGA 619215 Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || ||||||||| || | || ||||| || | |||| ||| || || || || ||| Sbjct 619216 CATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGA 619275 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| | ||| || || | ||| || ||||||||||| || || || ||||| Sbjct 619276 CCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAA 619335 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC--GTACGTTCTAtttttacttt 16412 | |||||| || || ||||| || ||||||| ||| | || | || || | | | Sbjct 619336 ACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCC--T 619393 Query 16413 ctatccattttttagcccaatttg-ctttttgtttAACACAGTTCATGTTCTCTATTGCA 16471 |||||| | | ||||| | | ||| | || | | || || || || || ||| Sbjct 619394 GGATCCATCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAG-GAATATTTTCAATGGCA 619452 Query 16472 TTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATAC 16531 || |||| ||| | || ||| ||| || || || || || || | | || Sbjct 619453 TTGAATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAG 619512 Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGAT 16591 | || || || || || ||||| ||||| || || |||||||| | ||||| | Sbjct 619513 GTCTCGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGG 619572 Query 16592 ATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCT 16651 ||||| ||||| | | || | || | ||||| ||||| || || || ||| || Sbjct 619573 ATTTGAACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCA 619632 Query 16652 GCAAAAAACGC 16662 ||||| || || Sbjct 619633 GCAAAGAATGC 619643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511953748800