Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 >seq1 Length=762788 Score = 174 bits (192), Expect = 2e-38 Identities = 480/728 (66%), Gaps = 12/728 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| ||||| ||||| |||||||| || ||||| ||| || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 13973 TCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 14030 ||||||||||| ||||| || || || | ||| ||||| | | || || | | || Sbjct 618985 TCCATAAAATCGAATGGGTTCGTA-ACGTTGAAATACTTT-TGATTGCCAAGAGCAACTA 619042 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 | | ||| || |||| || |||| |||||| ||||| || |||||||| | || Sbjct 619043 GCAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTA 619102 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 | || || | || | | ||| || ||||| || |||||||| | || | Sbjct 619103 GGGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGA 619162 Query 14151 TAATCGTAATAATTTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 14208 | || || ||| | || || ||| | || | || ||| | | ||| || Sbjct 619163 TTCTCTCAACAATCT--TTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGC 619220 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||||||| ||||| ||||| ||||| | ||| || || || || || |||| || || Sbjct 619221 AAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGG 619280 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328 |||||| ||| || |||| ||| || || || || || |||||||| ||||| | || Sbjct 619281 CATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACC 619340 Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388 || || |||||||| || | |||| ||| |||| || | || || | ||||| Sbjct 619341 TTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCA 619400 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | | | |||||||| | || | || || | || ||||||| ||||| |||| Sbjct 619401 TCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460 Query 14449 ATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 || |||| || | | |||| |||| || ||||| || | || | || Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGA--TGTAGGTGTCAATCAGCAGAGAGTAGGTCTCG 619518 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 ||||| ||||||||||| ||||| || || ||||| || | ||||||| ||| Sbjct 619519 GAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGA 619578 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 || || | | || | ||| |||| || || || || ||||| || || ||||| Sbjct 619579 ACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638 Query 14627 AATGCCAA 14634 |||||||| Sbjct 619639 AATGCCAA 619646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345551765440