Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 174 2e-38
>seq1
Length=762788
Score = 174 bits (192), Expect = 2e-38
Identities = 480/728 (66%), Gaps = 12/728 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||| ||||| ||||| |||||||| || ||||| ||| || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 13973 TCCATAAAATCAAATGGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 14030
||||||||||| ||||| || || || | ||| ||||| | | || || | | ||
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTA-ACGTTGAAATACTTT-TGATTGCCAAGAGCAACTA 619042
Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090
| | ||| || |||| || |||| |||||| ||||| || |||||||| | ||
Sbjct 619043 GCAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTA 619102
Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150
| || || | || | | ||| || ||||| || |||||||| | || |
Sbjct 619103 GGGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGA 619162
Query 14151 TAATCGTAATAATTTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 14208
| || || ||| | || || ||| | || | || ||| | | ||| ||
Sbjct 619163 TTCTCTCAACAATCT--TTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGC 619220
Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268
||||||| ||||| ||||| ||||| | ||| || || || || || |||| || ||
Sbjct 619221 AAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGG 619280
Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328
|||||| ||| || |||| ||| || || || || || |||||||| ||||| | ||
Sbjct 619281 CATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACC 619340
Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388
|| || |||||||| || | |||| ||| |||| || | || || | |||||
Sbjct 619341 TTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCA 619400
Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448
| | | |||||||| | || | || || | || ||||||| ||||| ||||
Sbjct 619401 TCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460
Query 14449 ATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506
|| |||| || | | |||| |||| || ||||| || | || | ||
Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGA--TGTAGGTGTCAATCAGCAGAGAGTAGGTCTCG 619518
Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566
||||| ||||||||||| ||||| || || ||||| || | ||||||| |||
Sbjct 619519 GAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGA 619578
Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626
|| || | | || | ||| |||| || || || || ||||| || || |||||
Sbjct 619579 ACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638
Query 14627 AATGCCAA 14634
||||||||
Sbjct 619639 AATGCCAA 619646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345551765440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |