Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 8e-16
seq6 87.8 1e-12
>seq8
Length=1564113
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || || || ||||| ||||||||||| | || ||| | | |||||||
Sbjct 561024 ACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 561083
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | || ||||| ||
Sbjct 561084 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 561143
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | | | ||||||| | |||| ||||| ||| || | ||
Sbjct 561144 ATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGTCTTA 561203
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || |||||||||||||| ||
Sbjct 561204 CCGGTTAAGGTCTTAACAAAAATTTGCATCTT 561235
>seq6
Length=1504611
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||||||||||||||| | || ||| | | |||||||
Sbjct 86281 ACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 86222
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| || |
Sbjct 86221 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGA 86162
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| | ||| ||| | || ||| | ||
Sbjct 86161 ATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTA 86102
Query 18297 CCGGTCAATGTTTTTACAAAA 18317
|| ||||| || || ||||||
Sbjct 86101 CCAGTCAAGGTCTTCACAAAA 86081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343963013960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |