Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 188 6e-43 seq2 185 8e-42 seq4 84.2 2e-11 >seq1 Length=762788 Score = 188 bits (208), Expect = 6e-43 Identities = 414/612 (68%), Gaps = 14/612 (2%) Strand=Plus/Minus Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749 |||||||| || || || || ||||| |||||||| |||||||| |||||||| | || Sbjct 619649 GTGTTGGCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTC 619590 Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809 ||| ||||| ||| | | || || | ||||||||||| || || | || ||| Sbjct 619589 TCAGCCGAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAA 619530 Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869 ||| | || || || | || || || || || || || ||| | || ||| | | ||| Sbjct 619529 AACATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCCCAAGGAG 619470 Query 57870 AAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGG 57929 | | || ||||| || || |||| || || |||| ||||||| || ||| Sbjct 619469 AGCGATTTCCTATTCAATGCCATTGAAAATATTCCTCAGATCAAGGAGAAGGCCGAATGG 619410 Query 57930 TCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCC 57989 | |||| |||||| | || |||| || || ||||| | |||| || || Sbjct 619409 GCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGCT 619350 Query 57990 GCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGC 58049 ||||| |||||| | ||||| || || |||||| || || || ||| | ||||| Sbjct 619349 GCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAA 619290 Query 58050 GGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCAT 58109 || |||||||||| || ||||| || ||| | || | | ||||||||||| || Sbjct 619289 GGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCAC 619230 Query 58110 ACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATC----G 58165 ||||||||||| || || | || | | || | | || || | || |||| | Sbjct 619229 ACTGATTTTGCATGTCT--TCTATTTGCGCACT-TGAAGAA---CAAGCCTGATCCAAAG 619176 Query 58166 CATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TTTGTCACCGAAGC 58222 | ||| || || || || ||||| |||| |||||||| ||| | | ||| ||| || Sbjct 619175 ATTGTTGAGAGAATCATTACTGAGGCTGTCGAAATCGAAAA-GAGATATTTCATCGATGC 619117 Query 58223 CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGT 58282 |||||| ||| || | || ||||||||| || | ||| | || |||| ||||| Sbjct 619116 CCTACCAGTGTCCCTACTTGGTATGAACGCCGACCTAATGAACCAATATGTTGAATTTGT 619057 Query 58283 TGCCGACAGACT 58294 |||||||||||| Sbjct 619056 TGCCGACAGACT 619045 >seq2 Length=1086951 Score = 185 bits (204), Expect = 8e-42 Identities = 347/510 (68%), Gaps = 0/510 (0%) Strand=Plus/Plus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || | ||| || | ||||||||| ||||| || | ||| || | || || | Sbjct 390528 TCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCT 390587 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| ||| || | || | |||||| || | || | ||||| || || | || Sbjct 390588 TACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGT 390647 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 ||| ||||| || || |||||||| ||||| || ||||| |||||||| || ||||||| Sbjct 390648 AAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGT 390707 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 |||| || | | ||| || | | ||| || || | ||| || || | | Sbjct 390708 TGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGG 390767 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | ||| | | |||| |||||| | ||| || || || || || | | || || |||| Sbjct 390768 AGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCA 390827 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || |||| ||||| ||| |||||||| || |||||| ||||||||| | || |||| Sbjct 390828 TGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCA 390887 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 |||||| |||||||| || | | || ||| |||| ||| | || || |||| Sbjct 390888 GGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGT 390947 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || || |||| ||||| |||||||| || |||| | || ||||| | Sbjct 390948 GAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGC 391007 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCA 23861 |||| ||||||| ||| || ||||| |||| Sbjct 391008 CGTGGATACCGACGGCAACACGCATGATCA 391037 >seq4 Length=1192607 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| ||||||| || || || ||| | || || ||| | || Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | |||||| | || ||||||||||| | || || |||||| Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || ||||| || | ||| | ||||| || Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| || | || |||| | || || || || |||| Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGGCTAAGAGGTGGTA 499303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360