Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 6e-43
seq2 185 8e-42
seq4 84.2 2e-11
>seq1
Length=762788
Score = 188 bits (208), Expect = 6e-43
Identities = 414/612 (68%), Gaps = 14/612 (2%)
Strand=Plus/Minus
Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749
|||||||| || || || || ||||| |||||||| |||||||| |||||||| | ||
Sbjct 619649 GTGTTGGCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTC 619590
Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809
||| ||||| ||| | | || || | ||||||||||| || || | || |||
Sbjct 619589 TCAGCCGAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAA 619530
Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869
||| | || || || | || || || || || || || ||| | || ||| | | |||
Sbjct 619529 AACATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCCCAAGGAG 619470
Query 57870 AAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGG 57929
| | || ||||| || || |||| || || |||| ||||||| || |||
Sbjct 619469 AGCGATTTCCTATTCAATGCCATTGAAAATATTCCTCAGATCAAGGAGAAGGCCGAATGG 619410
Query 57930 TCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCC 57989
| |||| |||||| | || |||| || || ||||| | |||| || ||
Sbjct 619409 GCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGCT 619350
Query 57990 GCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGC 58049
||||| |||||| | ||||| || || |||||| || || || ||| | |||||
Sbjct 619349 GCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAA 619290
Query 58050 GGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCAT 58109
|| |||||||||| || ||||| || ||| | || | | ||||||||||| ||
Sbjct 619289 GGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCAC 619230
Query 58110 ACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATC----G 58165
||||||||||| || || | || | | || | | || || | || |||| |
Sbjct 619229 ACTGATTTTGCATGTCT--TCTATTTGCGCACT-TGAAGAA---CAAGCCTGATCCAAAG 619176
Query 58166 CATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TTTGTCACCGAAGC 58222
| ||| || || || || ||||| |||| |||||||| ||| | | ||| ||| ||
Sbjct 619175 ATTGTTGAGAGAATCATTACTGAGGCTGTCGAAATCGAAAA-GAGATATTTCATCGATGC 619117
Query 58223 CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGT 58282
|||||| ||| || | || ||||||||| || | ||| | || |||| |||||
Sbjct 619116 CCTACCAGTGTCCCTACTTGGTATGAACGCCGACCTAATGAACCAATATGTTGAATTTGT 619057
Query 58283 TGCCGACAGACT 58294
||||||||||||
Sbjct 619056 TGCCGACAGACT 619045
>seq2
Length=1086951
Score = 185 bits (204), Expect = 8e-42
Identities = 347/510 (68%), Gaps = 0/510 (0%)
Strand=Plus/Plus
Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411
|||| || | ||| || | ||||||||| ||||| || | ||| || | || || |
Sbjct 390528 TCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCT 390587
Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471
| ||| ||| || | || | |||||| || | || | ||||| || || | ||
Sbjct 390588 TACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGT 390647
Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531
||| ||||| || || |||||||| ||||| || ||||| |||||||| || |||||||
Sbjct 390648 AAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGT 390707
Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591
|||| || | | ||| || | | ||| || || | ||| || || | |
Sbjct 390708 TGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGG 390767
Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651
| ||| | | |||| |||||| | ||| || || || || || | | || || ||||
Sbjct 390768 AGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCA 390827
Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711
| || |||| ||||| ||| |||||||| || |||||| ||||||||| | || ||||
Sbjct 390828 TGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCA 390887
Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771
|||||| |||||||| || | | || ||| |||| ||| | || || ||||
Sbjct 390888 GGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGT 390947
Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831
| || || |||| ||||| |||||||| || |||| | || ||||| |
Sbjct 390948 GAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGC 391007
Query 23832 CGTGTATACCGATGGCGACGCGCATCATCA 23861
|||| ||||||| ||| || ||||| ||||
Sbjct 391008 CGTGGATACCGACGGCAACACGCATGATCA 391037
>seq4
Length=1192607
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||| ||||||| || || || ||| | || || ||| | ||
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | |||||| | || ||||||||||| | || || ||||||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||| || || || ||||| || | ||| | ||||| ||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || | || |||| | || || || || ||||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGGCTAAGAGGTGGTA 499303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |