Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 248 1e-60
seq1 150 2e-31
seq7 129 7e-25
>seq2
Length=1086951
Score = 248 bits (274), Expect = 1e-60
Identities = 756/1155 (65%), Gaps = 24/1155 (2%)
Strand=Plus/Plus
Query 62939 CAATGCAACAGATGCCAGATTACACACGGC---TACCTCATTAGCATCCGCATATTGTAT 62995
|||||||||||| |||| ||||||||||| | |||| | | | || | |
Sbjct 390193 CAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAA---GAGTACTCGAC 390249
Query 62996 TATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTT 63055
|| ||| || | ||| | ||||||| || || | || | ||| ||| |||| |
Sbjct 390250 GATTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCT 390309
Query 63056 GTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 63115
|||||| | ||| || |||| |||||||||||||| ||||| |||||| ||||| |||
Sbjct 390310 GTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAAT 390369
Query 63116 CGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATA 63174
|| | ||| | | || |||| || || | ||| || | | ||||| | ||
Sbjct 390370 GGCATACCATA-GCTTCTGAGCTTTGATAGTC--TTTCTACCACGGCCCTCTTGCACGTA 390426
Query 63175 GAGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATC 63232
|| ||| || |||||| || || || | |||| | | | | ||| ||||
Sbjct 390427 ACGTTCATATAAAGCTTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACT 390486
Query 63233 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63292
|| | | ||| | ||| || |||| || | |||| ||||| || | ||| ||||
Sbjct 390487 AGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAAC 390546
Query 63293 CCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63352
||| ||||| || | |||||| | | ||| || || || || | |||| |
Sbjct 390547 CCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGG 390604
Query 63353 AT--CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410
|| ||| || | | |||||||| ||||| ||||| ||||| || || | | | ||
Sbjct 390605 ATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCT 390664
Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470
|| | ||||| || || ||||| | ||| | ||| ||||| || || || | | |||
Sbjct 390665 GGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATG 390724
Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530
|| |||||||| || || |||| |||||||| | || ||| || | | ||||||
Sbjct 390725 GGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATG 390784
Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590
|| || | || || || || || | || ||||| | || ||| ||| ||
Sbjct 390785 TTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAA 390844
Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650
|| || ||||| ||||| ||| || || ||||| | || |||||| ||||||
Sbjct 390845 GTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATC 390904
Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710
|| || ||| ||| || || || ||||| || || || ||||| || || || || |
Sbjct 390905 TGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGA 390964
Query 63711 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63770
|| | |||||||| || || | || || || || | || || || || ||
Sbjct 390965 GACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCA 391024
Query 63771 ACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAG 63830
|||||||| | || |||||||| | ||| | | ||| | || | |||||
Sbjct 391025 ACACGCATGATCAAATGCTGAGGACGTTCTGCGACTTTACCATCGATACGGAGTAAGTAC 391084
Query 63831 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63890
|| ||| | || || |||||||||||||||||| ||||||| ||||| | ||||
Sbjct 391085 GAACGTTCTAGGGTCTTGAAACCAAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATA 391144
Query 63891 ACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAA---TACTT-GAAAT 63946
| || ||||||| ||| || | | | || || ||| |||| | ||| |||||
Sbjct 391145 GCAGAGTTGAGCTCATCTTTGTGCTCCATGACAAT-TCC---GTAAACTTCCTTGGAAAT 391200
Query 63947 AATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 64006
|| || || || | ||||||||||| || ||||||| | | ||||| || ||| |
Sbjct 391201 CATGGGCGAGTGAATTCCATTTTTAGGGTTCACATAGTGGTACAAATCGCTCACCACCTG 391260
Query 64007 ACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAAT 64066
||| | || | |||| ||| || || || || || || | ||| ||||||| |
Sbjct 391261 CGAAAACTGCTTGGTAGTTTGCTTATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGT 391320
Query 64067 GGCATAATCCGGATG 64081
||||| || || ||
Sbjct 391321 CGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 150 bits (166), Expect = 2e-31
Identities = 485/734 (66%), Gaps = 19/734 (3%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| ||| ||| | |||||||| || || || || || |||| || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATT-CAGAAAT 33409
||||| ||||| || || || ||||| ||| |||| |||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469
|| ||| || || || ||||| | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATGGATACCGCATTTGTTATAA 33528
||||| || || | | | | || |||| ||| || || || | || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 33529 TAAATCT-AACGGTTTCTTCACTCGGTGGATGTAAT--AAATGTTTAAACATCAAACATG 33585
| ||| ||| | | | | || | | ||| | || || ||| | | |||||
Sbjct 619163 TTC-TCTCAACAATCTTTGGA-TCAG-GCTTGTTCTTCAAGTGCGCAAATAGAAGACATG 619219
Query 33586 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGG 33645
| ||||| ||| |||||||||||||| | ||||| || ||||| ||||| || ||||
Sbjct 619220 CAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGG 619279
Query 33646 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTC 33705
|||| | || ||| || ||||| || || | || || |||||||| ||||| | |
Sbjct 619280 GCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACAC 619339
Query 33706 CTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGTATCC 33762
|||| || ||||||||||| | | ||||||| || | | | | || ||| || ||||
Sbjct 619340 CTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCC 619399
Query 33763 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
| || || ||||| |||||||||| || | ||| || |||| |||||||| ||
Sbjct 619400 ATCTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAAT 619458
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881
|| | | | || || ||||| | || || || |||| ||| || | ||
Sbjct 619459 AGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCG 619518
Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941
|| || |||||||| || ||||| || ||||| || || | || || | || ||
Sbjct 619519 GAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGA 619578
Query 33942 ACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAA 33999
||||| | | || ||||| | || || || || || || || || || ||||
Sbjct 619579 ACTTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAA 619636
Query 34000 AAAACGCCAATACA 34013
| || ||||| |||
Sbjct 619637 AGAATGCCAACACA 619650
>seq7
Length=1626734
Score = 129 bits (142), Expect = 7e-25
Identities = 499/767 (65%), Gaps = 34/767 (4%)
Strand=Plus/Plus
Query 62766 TCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 62825
|| ||||||||||| |||||||| | | |||||||| |||| | || | |||||||
Sbjct 861538 TCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCTCATGTTGCTGTATTCAGCT 861597
Query 62826 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62885
||| || |||||| | | |||||| || | | | |||||| || | ||
Sbjct 861598 TCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAAATTTCTCGTAACAAGCTTT 861657
Query 62886 ACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC-------CCATCTATT---ACAAAC 62933
|| |||| | || | |||||||| | || || || || |||||
Sbjct 861658 ACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGTACCTTCGATCTTCACAAAA 861717
Query 62934 ATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA-TATTG 62992
| | ||||| ||||| ||||| ||||| |||| ||||| | | || |||||
Sbjct 861718 CTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTCATCTGG-TGAGCTGTATTG 861776
Query 62993 TATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTT 63052
| ||||| ||| || || |||| ||||| || | |||| |||||| ||
Sbjct 861777 AACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTT 861836
Query 63053 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 63112
||| || || | ||||||||| || ||||| ||| || || |||| ||| || ||
Sbjct 861837 TTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAA 861896
Query 63113 AATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTTGTATCTCCTTTCTCTTTCG 63170
||| | |||| | | | ||||| | | | || ||||| |||| || |
Sbjct 861897 AATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCT--CA 861954
Query 63171 TATAGAGT-ATACAATCGTTCGAACTCGTCTCCCCA--AACATTGTCCAATCTAGGACAT 63227
|| ||| | ||| |||| ||||||||| || || | || |||| || | ||| |
Sbjct 861955 TA-AGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGT--AAACCAGGTGCT 862011
Query 63228 TCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63285
|| ||||| | | || ||| || ||| | | || || || || |||||||| | |
Sbjct 862012 TCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGT 862069
Query 63286 CAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTC 63344
|||||||||| ||||| ||| || ||||| | || ||| ||| || ||||| |||
Sbjct 862070 CAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTC 862128
Query 63345 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63404
|| ||| | | || | | ||| ||| ||||||| || || | ||||||| || |
Sbjct 862129 TTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAA 862186
Query 63405 A--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63462
| | || |||| || || || || ||||| | ||| | ||| ||||| || |||| |
Sbjct 862187 AGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACAC 862246
Query 63463 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63509
| ||| |||| | ||| || || | ||||| | ||| || |||
Sbjct 862247 GTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
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