Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 2e-30
seq1 113 4e-20
>seq2
Length=1086951
Score = 147 bits (162), Expect = 2e-30
Identities = 348/526 (66%), Gaps = 0/526 (0%)
Strand=Plus/Plus
Query 38025 CATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTT 38084
||| || ||||| || ||||||| |||| || |||||| ||| | |||||| ||
Sbjct 390529 CATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTT 390588
Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144
|| || || | | | | ||| ||||| ||||||| |||||||||||||| ||
Sbjct 390589 ACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTA 390648
Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204
||| | | || |||||||| || | || || |||| || || | | | ||||| ||
Sbjct 390649 AATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTT 390708
Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264
|||| | | ||| || | |||||||| || | ||||| |||| | || || |
Sbjct 390709 GTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGA 390768
Query 38265 ACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAA 38324
|| ||| || || || || |||||| || || || ||| || || || |
Sbjct 390769 GCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCAT 390828
Query 38325 AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTAT 38384
|| |||| ||| || ||||| | |||||||| || ||| || || || | || |
Sbjct 390829 GGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAG 390888
Query 38385 AAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATG 38444
||||| |||||| ||||| ||||| |||||||| ||||| || || ||||| ||
Sbjct 390889 GAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTG 390948
Query 38445 TATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCC 38504
|||| || || |||| ||| || ||||| | || || || || | |||
Sbjct 390949 AGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCC 391008
Query 38505 GTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550
||| ||||| | | || | ||| | || ||| || || | ||||
Sbjct 391009 GTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCT 391054
>seq1
Length=762788
Score = 113 bits (124), Expect = 4e-20
Identities = 152/211 (72%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688
||| ||||||||| || | ||| |||||||| | ||||| |||||||| || ||||
Sbjct 619215 ACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAG 619274
Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748
||||||||||| ||| || |||| ||| || ||||| ||||| || || || |||||
Sbjct 619275 ACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAA 619334
Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA-----CCTTGTTGCTA 11803
| || ||||| || ||||| || || | ||| ||| || ||| ||| | ||
Sbjct 619335 AACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTG 619394
Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCT 11834
| |||||| | ||||||| || || ||||
Sbjct 619395 G--ATCCATCTGATGGCCCATTCGGCCTTCT 619423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524753147520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |