Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 250 3e-61
seq1 145 1e-29
seq7 116 5e-21
>seq2
Length=1086951
Score = 250 bits (276), Expect = 3e-61
Identities = 706/1072 (66%), Gaps = 18/1072 (2%)
Strand=Plus/Plus
Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871
|||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| |
Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332
Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCC 65930
||||||||||||| ||||| |||||| ||||| ||| || | ||| | | || ||||
Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCT 390391
Query 65931 TTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCGAACT 65988
|| || | ||| || | | ||||| | ||| || ||| || |||||| |
Sbjct 390392 TTGATAGTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATT 390449
Query 65989 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 66048
| || || | |||| | | | || ||| |||| || | | ||| | ||| || |
Sbjct 390450 CATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC 390509
Query 66049 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTC 66108
||| || | |||| ||||| || | ||| |||| ||| ||||| || |||||||
Sbjct 390510 CGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTC 390569
Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATC 66166
||| | ||| || || || || | |||| ||| ||| || | | |||||
Sbjct 390570 TGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATC 390627
Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 66226
| | ||||| ||||| ||||| || || | | | || || | ||||| || || |||||
Sbjct 390628 AGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATC 390687
Query 66227 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 66286
| ||| | ||| ||||| || || || | | ||| || ||||||||||| || |||||
Sbjct 390688 AACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACC 390747
Query 66287 ATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCC 66346
||||| || | || ||| || | | |||||| || || | || || ||
Sbjct 390748 GTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACC 390807
Query 66347 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 66406
|| || | || ||||| | || ||| ||| || ||||| ||||| || || ||
Sbjct 390808 GCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGA 390867
Query 66407 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 66466
|| || ||||| | || |||||| |||||| || || || ||| || || ||
Sbjct 390868 GTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTT 390927
Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526
||||| || || || ||||| || || || || ||| | |||||||| || || |
Sbjct 390928 GAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAG 390987
Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586
|| || || || | || || || || || |||||||| | || ||||||||
Sbjct 390988 CACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGG 391047
Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646
| ||| ||| || | || | ||||| || ||| | || || |||||
Sbjct 391048 ACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACC 391107
Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 66706
||||||||||||| ||||||| ||||| | |||| | |||||||| | ||| || |
Sbjct 391108 AAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTG 391167
Query 66707 TTTGTTAACTACATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTT 66762
| | || | ||| |||| | ||| ||||| || || || || | |||||||
Sbjct 391168 CTCCATGAC-AATTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTT 391223
Query 66763 TAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTT 66822
|||| || ||||||| | | ||||| || ||| | ||| | || | |||| |
Sbjct 391224 TAGGGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCT 391283
Query 66823 TGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
| || || || || | || | ||||||||||| | ||||| || || ||
Sbjct 391284 TATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 145 bits (160), Expect = 1e-29
Identities = 482/740 (65%), Gaps = 31/740 (4%)
Strand=Plus/Plus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| ||| ||| | |||||||| || || || ||||| | || || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 35985
||||| ||||||||||| || |||| || |||| |||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045
|| ||| || || |||||||| | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104
||||| || || | | | | || |||| ||| || ||| || || || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATA---------CAATAAATGTTTAAACATCA 36155
| | | || || || ||||| | || || ||| | |
Sbjct 619163 T---------TCTCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAA 619213
Query 36156 AACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGA 36215
|||||| ||||| ||| |||||||||||||| | ||||| || || || ||||| |
Sbjct 619214 GACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTA 619273
Query 36216 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 36275
| |||||||| | || ||| || ||||| || || | ||||| ||||| || ||||
Sbjct 619274 GACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGA 619333
Query 36276 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCACT--GTCAT 36332
||| ||||| || || |||||||| | | ||||||| || | | | | || ||| |
Sbjct 619334 AAACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCT 619393
Query 36333 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 36391
| ||||| || || ||||| |||||||||| || | ||| || | || || |||
Sbjct 619394 GGATCCATCTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCA 619452
Query 36392 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 36451
|| || || | | | || || ||||| | || || ||||||| ||| ||
Sbjct 619453 TTGAATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAG 619512
Query 36452 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 36511
| || || || |||||||| || || || || ||||| || || | || || |
Sbjct 619513 GTCTCGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGG 619572
Query 36512 ATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGG 36569
|| || ||||| | | || ||||| | || || || || || || ||||| |
Sbjct 619573 ATTTGAACTTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACG 619630
Query 36570 CTGCAAAAAACGCCAATACA 36589
| ||||| || ||||| |||
Sbjct 619631 CAGCAAAGAATGCCAACACA 619650
>seq7
Length=1626734
Score = 116 bits (128), Expect = 5e-21
Identities = 542/845 (64%), Gaps = 34/845 (4%)
Strand=Plus/Plus
Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGGATA 65539
||||| || |||||||| | ||||| || | | | ||| || | || ||||||
Sbjct 861460 TAAATCGTCTCGAAGATTTGTTTATTGAG-TATCGATGCCTCTATAGATTCGAATGGAAT 861518
Query 65540 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 65599
|| || | || ||| || ||||||||||| |||||||| | | |||||||| |||
Sbjct 861519 CTTCAAAATCATGAACAAATCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCT 861578
Query 65600 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 65659
| | || | |||||||||| || |||||| | | |||||| || | | |
Sbjct 861579 CATGTTGCTGTATTCAGCTTCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAA 861638
Query 65660 ATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGCTCATCT 65717
|||||| || | || || |||| | || | |||||||| | ||| | |
Sbjct 861639 ATTTCTCGTAACAAGCTTTACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGT 861698
Query 65718 A----------TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 65767
| | ||||| | | ||||| ||||| ||||| || || |||| |||
Sbjct 861699 ACCTTCGATCTTCACAAAACTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTC 861758
Query 65768 ATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826
|| | | || ||||| | ||||| ||| || || |||| || || || |
Sbjct 861759 ATCTGG-TGAGCTGTATTGAACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGA 861817
Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886
|||| |||||| ||||| || || | ||||||||| || ||||| ||| || |
Sbjct 861818 GGTTTTTTTGATTTGATTTTTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGG 861877
Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTT 65944
| |||| ||| || || ||| | |||| | | | ||||| | | | ||
Sbjct 861878 TCTCAACTTGACTTTGTAAAATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCG 861937
Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA--AACA 66002
||||| ||| || | || | ||| |||| ||||||||| || || | ||
Sbjct 861938 GTATCAACTTTTGCT--CATAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATC 861995
Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCA 66060
|||| || ||||| ||| ||||| | | || ||| || ||| | | || || |
Sbjct 861996 TTGT--AAACCAGGTGCTTCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAA 862051
Query 66061 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGT 66119
| || |||||||| | ||||||||||| ||||| ||| || | ||| | | ||| |
Sbjct 862052 CGCGCTTCATAAATAAGTCAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAAT 862110
Query 66120 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179
|| || ||||| ||||| ||| | | || | | ||| ||| ||||||| ||
Sbjct 862111 TCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGC 862170
Query 66180 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 66237
|| | ||||||| || || | || |||| || || || || ||||| | ||| | ||
Sbjct 862171 TCTAGGTATATG--CAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAG 862228
Query 66238 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGG 66297
| ||||| || |||| | | ||| |||| | |||||| || || ||||| | || |
Sbjct 862229 CTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTG 862288
Query 66298 AGATA 66302
| |||
Sbjct 862289 AAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172734182720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |