Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2 250 3e-61 seq1 145 1e-29 seq7 116 5e-21 >seq2 Length=1086951 Score = 250 bits (276), Expect = 3e-61 Identities = 706/1072 (66%), Gaps = 18/1072 (2%) Strand=Plus/Plus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 |||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| | Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCC 65930 ||||||||||||| ||||| |||||| ||||| ||| || | ||| | | || |||| Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCT 390391 Query 65931 TTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCGAACT 65988 || || | ||| || | | ||||| | ||| || ||| || |||||| | Sbjct 390392 TTGATAGTC--TTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATT 390449 Query 65989 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 66048 | || || | |||| | | | || ||| |||| || | | ||| | ||| || | Sbjct 390450 CATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC 390509 Query 66049 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTC 66108 ||| || | |||| ||||| || | ||| |||| ||| ||||| || ||||||| Sbjct 390510 CGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTC 390569 Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATC 66166 ||| | ||| || || || || | |||| ||| ||| || | | ||||| Sbjct 390570 TGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATC 390627 Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 66226 | | ||||| ||||| ||||| || || | | | || || | ||||| || || ||||| Sbjct 390628 AGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATC 390687 Query 66227 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 66286 | ||| | ||| ||||| || || || | | ||| || ||||||||||| || ||||| Sbjct 390688 AACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACC 390747 Query 66287 ATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCC 66346 ||||| || | || ||| || | | |||||| || || | || || || Sbjct 390748 GTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACC 390807 Query 66347 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 66406 || || | || ||||| | || ||| ||| || ||||| ||||| || || || Sbjct 390808 GCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGA 390867 Query 66407 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 66466 || || ||||| | || |||||| |||||| || || || ||| || || || Sbjct 390868 GTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTT 390927 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526 ||||| || || || ||||| || || || || ||| | |||||||| || || | Sbjct 390928 GAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAG 390987 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 || || || || | || || || || || |||||||| | || |||||||| Sbjct 390988 CACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGG 391047 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 | ||| ||| || | || | ||||| || ||| | || || ||||| Sbjct 391048 ACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACC 391107 Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 66706 ||||||||||||| ||||||| ||||| | |||| | |||||||| | ||| || | Sbjct 391108 AAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTG 391167 Query 66707 TTTGTTAACTACATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTT 66762 | | || | ||| |||| | ||| ||||| || || || || | ||||||| Sbjct 391168 CTCCATGAC-AATTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTT 391223 Query 66763 TAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTT 66822 |||| || ||||||| | | ||||| || ||| | ||| | || | |||| | Sbjct 391224 TAGGGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCT 391283 Query 66823 TGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 | || || || || | || | ||||||||||| | ||||| || || || Sbjct 391284 TATGCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq1 Length=762788 Score = 145 bits (160), Expect = 1e-29 Identities = 482/740 (65%), Gaps = 31/740 (4%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||| ||| | |||||||| || || || ||||| | || || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 35985 ||||| ||||||||||| || |||| || |||| |||| | | |||| || | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043 Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045 || ||| || || |||||||| | |||| ||||| | || ||||| || | || Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 ||||| || || | | | | || |||| ||| || ||| || || || || | Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATA---------CAATAAATGTTTAAACATCA 36155 | | | || || || ||||| | || || ||| | | Sbjct 619163 T---------TCTCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAA 619213 Query 36156 AACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGA 36215 |||||| ||||| ||| |||||||||||||| | ||||| || || || ||||| | Sbjct 619214 GACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTA 619273 Query 36216 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 36275 | |||||||| | || ||| || ||||| || || | ||||| ||||| || |||| Sbjct 619274 GACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGA 619333 Query 36276 AAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCACT--GTCAT 36332 ||| ||||| || || |||||||| | | ||||||| || | | | | || ||| | Sbjct 619334 AAACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCT 619393 Query 36333 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 36391 | ||||| || || ||||| |||||||||| || | ||| || | || || ||| Sbjct 619394 GGATCCATCTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCA 619452 Query 36392 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 36451 || || || | | | || || ||||| | || || ||||||| ||| || Sbjct 619453 TTGAATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAG 619512 Query 36452 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 36511 | || || || |||||||| || || || || ||||| || || | || || | Sbjct 619513 GTCTCGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGG 619572 Query 36512 ATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGG 36569 || || ||||| | | || ||||| | || || || || || || ||||| | Sbjct 619573 ATTTGAACTTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACG 619630 Query 36570 CTGCAAAAAACGCCAATACA 36589 | ||||| || ||||| ||| Sbjct 619631 CAGCAAAGAATGCCAACACA 619650 >seq7 Length=1626734 Score = 116 bits (128), Expect = 5e-21 Identities = 542/845 (64%), Gaps = 34/845 (4%) Strand=Plus/Plus Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGGATA 65539 ||||| || |||||||| | ||||| || | | | ||| || | || |||||| Sbjct 861460 TAAATCGTCTCGAAGATTTGTTTATTGAG-TATCGATGCCTCTATAGATTCGAATGGAAT 861518 Query 65540 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 65599 || || | || ||| || ||||||||||| |||||||| | | |||||||| ||| Sbjct 861519 CTTCAAAATCATGAACAAATCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCT 861578 Query 65600 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 65659 | | || | |||||||||| || |||||| | | |||||| || | | | Sbjct 861579 CATGTTGCTGTATTCAGCTTCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAA 861638 Query 65660 ATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGCTCATCT 65717 |||||| || | || || |||| | || | |||||||| | ||| | | Sbjct 861639 ATTTCTCGTAACAAGCTTTACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGT 861698 Query 65718 A----------TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 65767 | | ||||| | | ||||| ||||| ||||| || || |||| ||| Sbjct 861699 ACCTTCGATCTTCACAAAACTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTC 861758 Query 65768 ATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 || | | || ||||| | ||||| ||| || || |||| || || || | Sbjct 861759 ATCTGG-TGAGCTGTATTGAACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGA 861817 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 |||| |||||| ||||| || || | ||||||||| || ||||| ||| || | Sbjct 861818 GGTTTTTTTGATTTGATTTTTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGG 861877 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTT 65944 | |||| ||| || || ||| | |||| | | | ||||| | | | || Sbjct 861878 TCTCAACTTGACTTTGTAAAATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCG 861937 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA--AACA 66002 ||||| ||| || | || | ||| |||| ||||||||| || || | || Sbjct 861938 GTATCAACTTTTGCT--CATAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATC 861995 Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCA 66060 |||| || ||||| ||| ||||| | | || ||| || ||| | | || || | Sbjct 861996 TTGT--AAACCAGGTGCTTCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAA 862051 Query 66061 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGT 66119 | || |||||||| | ||||||||||| ||||| ||| || | ||| | | ||| | Sbjct 862052 CGCGCTTCATAAATAAGTCAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAAT 862110 Query 66120 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179 || || ||||| ||||| ||| | | || | | ||| ||| ||||||| || Sbjct 862111 TCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGC 862170 Query 66180 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 66237 || | ||||||| || || | || |||| || || || || ||||| | ||| | || Sbjct 862171 TCTAGGTATATG--CAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAG 862228 Query 66238 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGG 66297 | ||||| || |||| | | ||| |||| | |||||| || || ||||| | || | Sbjct 862229 CTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTG 862288 Query 66298 AGATA 66302 | ||| Sbjct 862289 AAATA 862293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172734182720