Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=1086951 Score = 89.7 bits (98), Expect = 5e-13 Identities = 471/743 (63%), Gaps = 33/743 (4%) Strand=Plus/Plus Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692 |||| || |||||||| || ||||||||||| || |||| | || | || ||||| Sbjct 390197 GCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCA 390256 Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAA--TTACTTTGATTGCTTTTGCGGTTAC 153750 |||||| || | || || || ||| || |||| || || | ||||| Sbjct 390257 CAACACAAGTTAGAAGACTTGAT--GGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTAC 390314 Query 153751 AAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATAG--T 153808 ||| || ||||| | |||| |||| || |||||||| | ||| ||||| ||| | | Sbjct 390315 AAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCAT 390374 Query 153809 ACGCATCAATG-TGACCGCGGGCATTTGATCGCGAAACT-----GGCCCTTGTCTTCGTA 153862 || ||| | ||| | |||||| | || |||||| | |||| Sbjct 390375 AC-CATAGCTTCTGAGC-------TTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTA 390426 Query 153863 GTGTTTGTACCAGTATTCAAACTCATCACCAAACGTATTGTTAAGCTCGGGACATTCGTT 153922 ||| || | ||| || ||||||||| | || | ||| ||||| ||| | Sbjct 390427 ACGTTCATATAAAGCTTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACT 390486 Query 153923 GGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAAC 153982 || | | || | |||| || || |||||||| | ||| || | ||| ||||| Sbjct 390487 AGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAAC 390546 Query 153983 CCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCAT 154042 |||||| || | || || | || | ||||| | || |||| || || Sbjct 390547 CCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGAT 390606 Query 154043 GTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTT 154102 || | | ||| | || || | ||||| ||||| | ||||| ||| ||| ||| Sbjct 390607 GTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGG 390666 Query 154103 ACGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGG 154159 | |||| || || |||| |||| ||| | | |||||| | || |||| |||||| Sbjct 390667 TCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGG 390726 Query 154160 TAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTG----CTGTTGCGGCCTCGAA 154215 | | ||| | | |||||||| ||| | ||| | | |||| | |||| Sbjct 390727 GATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAA----CGAA 390782 Query 154216 CGCTGTTTACGTTTAATCCAATACCGCC-GCCGTGTTTGGAGATCATGGCGCAATCGTTC 154274 | ||| | || ||||| |||||||| || || || |||||||||||| || || ||| Sbjct 390783 TGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTT-GGAGATCATGGCACATTCTTTC 390841 Query 154275 AATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTC 154334 || || | |||||||| ||| || || ||||| | |||||||| ||| | Sbjct 390842 AAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGAC 390901 Query 154335 ATCTGCGGAGTTGGAGTGCCGGC 154357 ||||| ||| ||||| ||||| Sbjct 390902 ATCTGAGGATGAGGAGTACCGGC 390924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063950393600