Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 5e-13
>seq2
Length=1086951
Score = 89.7 bits (98), Expect = 5e-13
Identities = 471/743 (63%), Gaps = 33/743 (4%)
Strand=Plus/Plus
Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692
|||| || |||||||| || ||||||||||| || |||| | || | || |||||
Sbjct 390197 GCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCA 390256
Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAA--TTACTTTGATTGCTTTTGCGGTTAC 153750
|||||| || | || || || ||| || |||| || || | |||||
Sbjct 390257 CAACACAAGTTAGAAGACTTGAT--GGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTAC 390314
Query 153751 AAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATAG--T 153808
||| || ||||| | |||| |||| || |||||||| | ||| ||||| ||| | |
Sbjct 390315 AAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCAT 390374
Query 153809 ACGCATCAATG-TGACCGCGGGCATTTGATCGCGAAACT-----GGCCCTTGTCTTCGTA 153862
|| ||| | ||| | |||||| | || |||||| | ||||
Sbjct 390375 AC-CATAGCTTCTGAGC-------TTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTA 390426
Query 153863 GTGTTTGTACCAGTATTCAAACTCATCACCAAACGTATTGTTAAGCTCGGGACATTCGTT 153922
||| || | ||| || ||||||||| | || | ||| ||||| ||| |
Sbjct 390427 ACGTTCATATAAAGCTTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACT 390486
Query 153923 GGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAAC 153982
|| | | || | |||| || || |||||||| | ||| || | ||| |||||
Sbjct 390487 AGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAAC 390546
Query 153983 CCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCAT 154042
|||||| || | || || | || | ||||| | || |||| || ||
Sbjct 390547 CCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGAT 390606
Query 154043 GTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTT 154102
|| | | ||| | || || | ||||| ||||| | ||||| ||| ||| |||
Sbjct 390607 GTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGG 390666
Query 154103 ACGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGG 154159
| |||| || || |||| |||| ||| | | |||||| | || |||| ||||||
Sbjct 390667 TCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGG 390726
Query 154160 TAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTG----CTGTTGCGGCCTCGAA 154215
| | ||| | | |||||||| ||| | ||| | | |||| | ||||
Sbjct 390727 GATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAA----CGAA 390782
Query 154216 CGCTGTTTACGTTTAATCCAATACCGCC-GCCGTGTTTGGAGATCATGGCGCAATCGTTC 154274
| ||| | || ||||| |||||||| || || || |||||||||||| || || |||
Sbjct 390783 TGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTT-GGAGATCATGGCACATTCTTTC 390841
Query 154275 AATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTC 154334
|| || | |||||||| ||| || || ||||| | |||||||| ||| |
Sbjct 390842 AAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGAC 390901
Query 154335 ATCTGCGGAGTTGGAGTGCCGGC 154357
||||| ||| ||||| |||||
Sbjct 390902 ATCTGAGGATGAGGAGTACCGGC 390924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063950393600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |