Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 291 1e-73 seq1 150 3e-31 seq7 134 2e-26 >seq2 Length=1086951 Score = 291 bits (322), Expect = 1e-73 Identities = 1323/2075 (64%), Gaps = 48/2075 (2%) Strand=Plus/Plus Query 78714 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 ||||| | ||||| || | ||| || || | || || | | |||||||| || || | Sbjct 389274 CAATGGTAAATTGGATAGCAGCAGAGGCAGCTTGGGTCCTCAAGTAGTACATACCGGTCT 389333 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | ||| |||||||||| || |||||||| || | ||| | ||| | Sbjct 389334 TCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTACCCATTGTTGGAGCAC 389393 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 ||||| | |||| |||||| |||||| ||| || | || |||||||| | Sbjct 389394 GAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAACGATCAGCAGCCATGT 389453 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 78952 || || |||||||| | | |||||| | || || |||| ||| | |||| | Sbjct 389454 CAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGGTCCTTCAATTCTTGAG 389513 Query 78953 GAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTT 79009 ||| ||| | || || |||||||| || || | ||||| | ||| || ||| Sbjct 389514 GAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATGTGAGACTTCATAGCTT 389573 Query 79010 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 79069 ||| ||||| || ||| | | | | | |||||| || | ||| |||| Sbjct 389574 CATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGATTGACAATTTGGAATT 389633 Query 79070 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTAT 79129 | || || | || | || | ||| || || |||||||||||| | |||| || | Sbjct 389634 CACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGT 389693 Query 79130 TTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 79189 ||||| || || | ||| || || |||||||| || || | ||| | | ||||||| Sbjct 389694 AACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAA 389753 Query 79190 GACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAA 79249 ||||| | | || | || | | || |||||||||||| ||||||| || Sbjct 389754 TACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCATAGATCAGTAGGTGTCC 389813 Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309 ||| | ||| |||| |||||||| | ||| ||||| || |||| || | Sbjct 389814 TGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGT 389873 Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369 | || || || | ||| || || ||||||| || ||| ||| || || | Sbjct 389874 ATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCT 389933 Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 | || | | |||| | |||| || || | || || ||| | || | | Sbjct 389934 CAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCA 389993 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 | || | || || || ||||||||||| | | | |||||||| |||||| | || || Sbjct 389994 TGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATC 390053 Query 79490 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546 || ||| ||| || |||||||| ||| || || | | | || | ||| | | Sbjct 390054 TTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGG 390110 Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAAT-----CA---AATCGT-CCATCTA 79597 | || ||| | || | ||| || ||| | || | || | || ||| Sbjct 390111 TGACAACCTTGGAAATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTT 390170 Query 79598 ------TTACAAACA-TGTT--CAACGCGACAGATGCCAGATTACAAACGGC---TACCT 79645 || ||| | || | ||| || ||||| |||| ||||| ||||| | ||| Sbjct 390171 CAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCT 390230 Query 79646 CATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705 | | | | || | | |||||| || | |||| | |||| ||||| || | Sbjct 390231 CTGGGGAA---GAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTACCAA 390287 Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765 || | ||| ||| |||| ||||||| | ||| || |||| ||||| |||||||| | Sbjct 390288 GGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGG 390347 Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTG 79824 |||| |||||| ||||| ||| || | ||| | | || |||| || || || ||| Sbjct 390348 TTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCTTTGAT---AGTCTTT 390403 Query 79825 -TATCTCTTTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | | ||||| | ||| || |||||| |||||| || || || | ||| Sbjct 390404 CTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTCATCACCATAGACA 390463 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 ||| | | || ||| ||| ||| | | ||| | ||| || || | || | ||| Sbjct 390464 TCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACT 390523 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 | ||||| || | ||| |||| ||| ||||| || | |||||||| | || Sbjct 390524 CTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCT 390583 Query 80002 TCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 || || || || | |||| ||| ||| || | | |||||||| ||||| |||| Sbjct 390584 TCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTT 390641 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 | ||||| || || | | | || |||| ||||| || || ||||| | ||| | ||| | Sbjct 390642 CTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAG 390701 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 |||| || || || | | ||| || ||||||||||| || ||||| ||||| || | | Sbjct 390702 TGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAA 390761 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 | ||| || | | |||||| || || | || || || || || | || | Sbjct 390762 TGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGG 390821 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 |||| | || ||| ||| || ||||| ||||| || || ||| || || ||||| Sbjct 390822 AGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGG 390881 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 | || |||||| |||||| || || || ||| || || || ||||| || || | Sbjct 390882 CTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCG 390941 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419 | ||||| || || || || ||||| |||||||| || || | || ||| || | Sbjct 390942 ATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGT 391001 Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479 | | || || || || || |||||||| | || |||||||| | ||| ||| | Sbjct 391002 CGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGACTT 391061 Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 80539 | || || | ||||| || ||| | || || |||||||||||||||||| Sbjct 391062 TACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATAGTTGTATT 391121 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 ||||||| ||||| | |||| | |||||||| | ||| || | | | || | | Sbjct 391122 GGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGCTCCATGAC-AATT 391180 Query 80600 CCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658 || | | ||| ||||| || || || || | ||||||||||| || ||||||| | Sbjct 391181 CCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGGGTTCACATAGTGG 391240 Query 80659 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718 | ||||| || ||| | ||| | || | |||| ||| || || || || | Sbjct 391241 TACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATGCAGGTTGGAAATC 391300 Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || | ||| |||||||| | ||||| || || || Sbjct 391301 GCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq1 Length=762788 Score = 150 bits (166), Expect = 3e-31 Identities = 479/730 (66%), Gaps = 11/730 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||| ||| | |||||||| || || || || || |||| || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 49787 ||||| ||||| || || || ||||| || |||| |||| | | |||| || | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847 || ||| || || |||||||| | |||| ||||| | || ||||| || | || Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAA 49906 ||||| || || | | | | || |||| ||| || || || || || || | Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162 Query 49907 TAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 49965 | ||| ||| | | | | || | | || || ||| | | |||||| Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221 Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025 ||||| ||| |||||||||||||| | |||||| || || || ||||| || |||||| Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281 Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085 || | || ||| || ||||| || || | ||||| || || || ||||| | ||| Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCT--GTCATGTATCCA- 50141 || || || |||||||| || | ||||||| || | | | | || ||| || ||||| Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401 Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 || || ||||| |||||||||| || | ||| || |||| |||||||| || || Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460 Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261 | | | || || ||||| | || || || |||| ||| || | || || Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520 Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321 || |||||||| || ||||| || ||||| || || | || || | || || || Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580 Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 ||| | | || || | || || || || || || ||||| || ||||| || Sbjct 619581 TTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAA 619640 Query 50382 CGCCAATACA 50391 ||||| ||| Sbjct 619641 TGCCAACACA 619650 >seq7 Length=1626734 Score = 134 bits (148), Expect = 2e-26 Identities = 385/577 (67%), Gaps = 20/577 (3%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTC 79673 || || ||||| ||||| || || |||| ||||| | | || ||||| | || || Sbjct 861727 GCAACTGATGCAAGATTGCACACAGCTATCTCATCTGG-TGAGCTGTATTGAACAATCTC 861785 Query 79674 AGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 79733 ||||||||| ||||||| || || | |||| |||||| ||||| || || Sbjct 861786 GCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTTTTTATTGCA 861845 Query 79734 CGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 79793 | ||||||||| || ||||| ||| || || |||| ||| || || ||| | | Sbjct 861846 GGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAAAATTTCGCT 861905 Query 79794 CCAGACGACTCGAGCCTTTATTATA--GACTTGTATCT-CTTTT-CTCTTTCGTATTGTG 79849 ||| | | | ||||| | | | ||| ||||| ||||| ||| | | ||| Sbjct 861906 CCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCTCATAAG-ATTC-- 861962 Query 79850 TATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909 |||||||| ||||||||| || || | ||| | ||| ||||| |||||| || Sbjct 861963 -ATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAACCAGGTGCTTCGTCCGGGG 862021 Query 79910 ACATCAACGAC--CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCA 79967 | | || ||| || ||| ||| || || || || |||||||| | ||||||||||| Sbjct 862022 AAA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCA 862079 Query 79968 AAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 80026 ||||| ||| || ||||| | | ||| || || ||||| ||||| ||| | Sbjct 862080 GAGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTT 862138 Query 80027 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGG 80084 | || | | ||| ||| ||||||| || || | ||||||| || || | ||||| Sbjct 862139 GTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAAGGCACCCGG 862196 Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144 | || || || || ||||| | ||| | ||| ||||| || |||| | | ||| || Sbjct 862197 CCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGG 862256 Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 || | |||||| || || ||||| | || || ||| Sbjct 862257 AACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120