Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 291 1e-73
seq1 150 3e-31
seq7 134 2e-26
>seq2
Length=1086951
Score = 291 bits (322), Expect = 1e-73
Identities = 1323/2075 (64%), Gaps = 48/2075 (2%)
Strand=Plus/Plus
Query 78714 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772
||||| | ||||| || | ||| || || | || || | | |||||||| || || |
Sbjct 389274 CAATGGTAAATTGGATAGCAGCAGAGGCAGCTTGGGTCCTCAAGTAGTACATACCGGTCT 389333
Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832
| | ||| |||||||||| || |||||||| || | ||| | ||| |
Sbjct 389334 TCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTACCCATTGTTGGAGCAC 389393
Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892
||||| | |||| |||||| |||||| ||| || | || |||||||| |
Sbjct 389394 GAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAACGATCAGCAGCCATGT 389453
Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 78952
|| || |||||||| | | |||||| | || || |||| ||| | |||| |
Sbjct 389454 CAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGGTCCTTCAATTCTTGAG 389513
Query 78953 GAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTT 79009
||| ||| | || || |||||||| || || | ||||| | ||| || |||
Sbjct 389514 GAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATGTGAGACTTCATAGCTT 389573
Query 79010 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 79069
||| ||||| || ||| | | | | | |||||| || | ||| ||||
Sbjct 389574 CATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGATTGACAATTTGGAATT 389633
Query 79070 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTAT 79129
| || || | || | || | ||| || || |||||||||||| | |||| || |
Sbjct 389634 CACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGT 389693
Query 79130 TTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 79189
||||| || || | ||| || || |||||||| || || | ||| | | |||||||
Sbjct 389694 AACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAA 389753
Query 79190 GACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAA 79249
||||| | | || | || | | || |||||||||||| ||||||| ||
Sbjct 389754 TACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCATAGATCAGTAGGTGTCC 389813
Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309
||| | ||| |||| |||||||| | ||| ||||| || |||| || |
Sbjct 389814 TGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGT 389873
Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369
| || || || | ||| || || ||||||| || ||| ||| || || |
Sbjct 389874 ATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCT 389933
Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429
| || | | |||| | |||| || || | || || ||| | || | |
Sbjct 389934 CAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCA 389993
Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489
| || | || || || ||||||||||| | | | |||||||| |||||| | || ||
Sbjct 389994 TGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATC 390053
Query 79490 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546
|| ||| ||| || |||||||| ||| || || | | | || | ||| | |
Sbjct 390054 TTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGG 390110
Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAAT-----CA---AATCGT-CCATCTA 79597
| || ||| | || | ||| || ||| | || | || | || |||
Sbjct 390111 TGACAACCTTGGAAATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTT 390170
Query 79598 ------TTACAAACA-TGTT--CAACGCGACAGATGCCAGATTACAAACGGC---TACCT 79645
|| ||| | || | ||| || ||||| |||| ||||| ||||| | |||
Sbjct 390171 CAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCT 390230
Query 79646 CATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705
| | | | || | | |||||| || | |||| | |||| ||||| || |
Sbjct 390231 CTGGGGAA---GAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTACCAA 390287
Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765
|| | ||| ||| |||| ||||||| | ||| || |||| ||||| |||||||| |
Sbjct 390288 GGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGG 390347
Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTG 79824
|||| |||||| ||||| ||| || | ||| | | || |||| || || || |||
Sbjct 390348 TTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCTTTGAT---AGTCTTT 390403
Query 79825 -TATCTCTTTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881
|| | | ||||| | ||| || |||||| |||||| || || || | |||
Sbjct 390404 CTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTCATCACCATAGACA 390463
Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941
||| | | || ||| ||| ||| | | ||| | ||| || || | || | |||
Sbjct 390464 TCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACT 390523
Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001
| ||||| || | ||| |||| ||| ||||| || | |||||||| | ||
Sbjct 390524 CTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCT 390583
Query 80002 TCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCAGAATGCCACGGTT 80059
|| || || || | |||| ||| ||| || | | |||||||| ||||| ||||
Sbjct 390584 TCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTT 390641
Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119
| ||||| || || | | | || |||| ||||| || || ||||| | ||| | ||| |
Sbjct 390642 CTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAG 390701
Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179
|||| || || || | | ||| || ||||||||||| || ||||| ||||| || | |
Sbjct 390702 TGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAA 390761
Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239
| ||| || | | |||||| || || | || || || || || | || |
Sbjct 390762 TGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGG 390821
Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299
|||| | || ||| ||| || ||||| ||||| || || ||| || || |||||
Sbjct 390822 AGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGG 390881
Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359
| || |||||| |||||| || || || ||| || || || ||||| || || |
Sbjct 390882 CTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCG 390941
Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419
| ||||| || || || || ||||| |||||||| || || | || ||| || |
Sbjct 390942 ATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGT 391001
Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479
| | || || || || || |||||||| | || |||||||| | ||| ||| |
Sbjct 391002 CGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGACTT 391061
Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 80539
| || || | ||||| || ||| | || || ||||||||||||||||||
Sbjct 391062 TACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATAGTTGTATT 391121
Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599
||||||| ||||| | |||| | |||||||| | ||| || | | | || | |
Sbjct 391122 GGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGCTCCATGAC-AATT 391180
Query 80600 CCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658
|| | | ||| ||||| || || || || | ||||||||||| || ||||||| |
Sbjct 391181 CCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGGGTTCACATAGTGG 391240
Query 80659 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718
| ||||| || ||| | ||| | || | |||| ||| || || || || |
Sbjct 391241 TACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATGCAGGTTGGAAATC 391300
Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|| | ||| |||||||| | ||||| || || ||
Sbjct 391301 GCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 150 bits (166), Expect = 3e-31
Identities = 479/730 (66%), Gaps = 11/730 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| ||| | |||||||| || || || || || |||| || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 49787
||||| ||||| || || || ||||| || |||| |||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847
|| ||| || || |||||||| | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAA 49906
||||| || || | | | | || |||| ||| || || || || || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 49907 TAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 49965
| ||| ||| | | | | || | | || || ||| | | ||||||
Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221
Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025
||||| ||| |||||||||||||| | |||||| || || || ||||| || ||||||
Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281
Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085
|| | || ||| || ||||| || || | ||||| || || || ||||| | |||
Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341
Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCT--GTCATGTATCCA- 50141
|| || || |||||||| || | ||||||| || | | | | || ||| || |||||
Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401
Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201
|| || ||||| |||||||||| || | ||| || |||| |||||||| || ||
Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460
Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261
| | | || || ||||| | || || || |||| ||| || | || ||
Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520
Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321
|| |||||||| || ||||| || ||||| || || | || || | || || ||
Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580
Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381
||| | | || || | || || || || || || ||||| || ||||| ||
Sbjct 619581 TTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAA 619640
Query 50382 CGCCAATACA 50391
||||| |||
Sbjct 619641 TGCCAACACA 619650
>seq7
Length=1626734
Score = 134 bits (148), Expect = 2e-26
Identities = 385/577 (67%), Gaps = 20/577 (3%)
Strand=Plus/Plus
Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTC 79673
|| || ||||| ||||| || || |||| ||||| | | || ||||| | || ||
Sbjct 861727 GCAACTGATGCAAGATTGCACACAGCTATCTCATCTGG-TGAGCTGTATTGAACAATCTC 861785
Query 79674 AGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 79733
||||||||| ||||||| || || | |||| |||||| ||||| || ||
Sbjct 861786 GCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTTTTTATTGCA 861845
Query 79734 CGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 79793
| ||||||||| || ||||| ||| || || |||| ||| || || ||| | |
Sbjct 861846 GGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAAAATTTCGCT 861905
Query 79794 CCAGACGACTCGAGCCTTTATTATA--GACTTGTATCT-CTTTT-CTCTTTCGTATTGTG 79849
||| | | | ||||| | | | ||| ||||| ||||| ||| | | |||
Sbjct 861906 CCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCTCATAAG-ATTC-- 861962
Query 79850 TATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909
|||||||| ||||||||| || || | ||| | ||| ||||| |||||| ||
Sbjct 861963 -ATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAACCAGGTGCTTCGTCCGGGG 862021
Query 79910 ACATCAACGAC--CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCA 79967
| | || ||| || ||| ||| || || || || |||||||| | |||||||||||
Sbjct 862022 AAA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCA 862079
Query 79968 AAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 80026
||||| ||| || ||||| | | ||| || || ||||| ||||| ||| |
Sbjct 862080 GAGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTT 862138
Query 80027 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGG 80084
| || | | ||| ||| ||||||| || || | ||||||| || || | |||||
Sbjct 862139 GTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAAGGCACCCGG 862196
Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144
| || || || || ||||| | ||| | ||| ||||| || |||| | | ||| ||
Sbjct 862197 CCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGG 862256
Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181
|| | |||||| || || ||||| | || || |||
Sbjct 862257 AACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268728173120
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