Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 183 3e-41 >seq1 Length=762788 Score = 183 bits (202), Expect = 3e-41 Identities = 482/728 (66%), Gaps = 12/728 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||| ||||| ||||| |||||||| || ||||| ||| || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 13641 TCCATAAAATCAAATGGATTTATTGACAT--AAACACTTTATCACAACCTAGTTCTAATA 13698 ||||||||||| ||||| || | || | ||| ||||| | | || || | | || Sbjct 618985 TCCATAAAATCGAATGGGTTCGTA-ACGTTGAAATACTTT-TGATTGCCAAGAGCAACTA 619042 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 | | ||| || |||| ||| |||| |||||| ||||| || |||||||| | || Sbjct 619043 GCAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTA 619102 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 | || || | || | | ||| || ||||| || |||||||| | || | Sbjct 619103 GGGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGA 619162 Query 13819 TAATTGTAATAATCTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 13876 | | || ||||| || || ||| | || | || ||| | | ||| || Sbjct 619163 TTCTCTCAACAATCT--TTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGC 619220 Query 13877 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 13936 ||||||| ||||| ||||| ||||| | ||| || || || || || |||| || || Sbjct 619221 AAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGG 619280 Query 13937 CATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCC 13996 |||||| ||| || |||| ||| || || || ||||| || ||||| ||||| | || Sbjct 619281 CATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACC 619340 Query 13997 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14056 || || |||||||| || | |||| ||| |||| || | || || | ||||| Sbjct 619341 TTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCA 619400 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | | | |||||||| | || | || || | || ||||||| ||||| |||| Sbjct 619401 TCTGATGGCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460 Query 14117 ATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14174 | || |||| || | | |||| |||| || ||||| || | || | || Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGA--TGTAGGTGTCAATCAGCAGAGAGTAGGTCTCG 619518 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234 ||||| ||||||||||| ||||| || || |||||||| | ||||| | ||| Sbjct 619519 GAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGA 619578 Query 14235 ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14294 ||||| | | || | ||| |||| || || || || ||||| || || ||||| Sbjct 619579 ACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638 Query 14295 AATGCCAA 14302 |||||||| Sbjct 619639 AATGCCAA 619646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727952027200