Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 253 3e-62
seq7 113 6e-20
>seq2
Length=1086951
Score = 253 bits (280), Expect = 3e-62
Identities = 704/1069 (66%), Gaps = 12/1069 (1%)
Strand=Plus/Plus
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
|||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| |
Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCC 71892
| || |||||||| ||||| |||||| ||||| ||| || | ||| | | || ||||
Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCT 390391
Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACT 71950
|| || | || | || | | ||||| | ||| || |||||| |||||| |
Sbjct 390392 TTGATAGTCTT--TCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATT 390449
Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010
| || || | ||| | | | || ||| |||| | || | | ||| | ||| || |
Sbjct 390450 CATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC 390509
Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070
| | || | |||| ||||| || | ||| |||| ||| ||||| || | |||||
Sbjct 390510 CGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTC 390569
Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATC 72128
||| | || || || || || | |||| ||| ||| || | | |||||
Sbjct 390570 TGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATC 390627
Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188
||| ||||| ||||| ||||| || || | | | || || | ||||| || || |||||
Sbjct 390628 AGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATC 390687
Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248
| ||| | ||| ||||| || || || | | ||| || ||||||||||| || | |||
Sbjct 390688 AACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACC 390747
Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCC 72308
||||| || | || ||| || | | |||||| ||| || | || || ||
Sbjct 390748 GTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACC 390807
Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368
|| || | || ||||| | || ||| ||| || ||||| ||||| || || ||
Sbjct 390808 GCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGA 390867
Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 72428
|| || ||||| | || |||||| |||||| || || || ||| || || ||
Sbjct 390868 GTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTT 390927
Query 72429 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 72488
||||| || || || ||||| || || || || ||||| |||||||| || || |
Sbjct 390928 GAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAG 390987
Query 72489 AGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGG 72548
|| ||| || || | || || || || || |||||||| | || |||||||||
Sbjct 390988 CACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGG 391047
Query 72549 TCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608
| ||| ||| || || || | ||||| || ||| | || || |||||
Sbjct 391048 ACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACC 391107
Query 72609 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATA 72668
||||||||||||| ||||||| ||||| | |||| | || ||||| | ||| || |
Sbjct 391108 AAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTG 391167
Query 72669 TTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAG 72727
| | || || ||| | | ||| ||||| || || || || | ||||||||||
Sbjct 391168 CTCCATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAG 391226
Query 72728 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 72787
| || ||||||| | | ||||| || ||| | ||| | || | |||| ||| |
Sbjct 391227 GGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTAT 391286
Query 72788 GTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| || || || | || | ||| ||||||| | ||||| || || ||
Sbjct 391287 GCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq7
Length=1626734
Score = 113 bits (124), Expect = 6e-20
Identities = 378/576 (66%), Gaps = 18/576 (3%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
||||| ||||| ||||| || || |||| ||||| | | ||||| | ||| ||
Sbjct 861727 GCAACTGATGCAAGATTGCACACAGCTATCTCATCTGGTGAGCTGTATTGAACAATCTCG 861786
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||| || || |||| || || || | |||| |||||| ||||| || ||
Sbjct 861787 CAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTTTTTATTGCAG 861846
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
| ||||||||| || || || ||| || || |||| ||| || || ||| | ||
Sbjct 861847 GAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAAAATTTCGCTC 861906
Query 71878 CAGACGACTCGAGCCTTTATTATATT--CTTGTATCT-CTTTT-CTCTTTCGTATTGTGT 71933
|| | | | ||||| | | | || | ||||| ||||| ||| | | |||
Sbjct 861907 CAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCTCATAAG-ATTC--- 861962
Query 71934 ATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993
|||||||| ||||||||| || || | || | ||| ||||| ||| | ||| |
Sbjct 861963 ATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAACCAGGTGCTTCGTCCGGGGA 862022
Query 71994 CATCAATGAC--CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051
| || ||| || ||| ||| || | || || |||||||| | |||||||||||
Sbjct 862023 AA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCAG 862080
Query 72052 AGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 72110
||||| ||| || ||||| | | ||| || || ||||| ||||| ||| |
Sbjct 862081 AGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTTG 862139
Query 72111 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGC 72168
| || | | ||| ||| ||||||| || || | ||||||| || || | ||||||
Sbjct 862140 TAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAAGGCACCCGGC 862197
Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228
| || || || || ||||| | ||| | ||| ||||| || |||| | | ||| |||
Sbjct 862198 CTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGGA 862257
Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATA 72264
| | |||||| || | ||||| | || || |||
Sbjct 862258 ACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139132886080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |