Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 253 3e-62 seq7 113 6e-20 >seq2 Length=1086951 Score = 253 bits (280), Expect = 3e-62 Identities = 704/1069 (66%), Gaps = 12/1069 (1%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 |||||||||| || | || | ||| ||| |||| ||||||| | ||| || |||| | Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCC 71892 | || |||||||| ||||| |||||| ||||| ||| || | ||| | | || |||| Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCT 390391 Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACT 71950 || || | || | || | | ||||| | ||| || |||||| |||||| | Sbjct 390392 TTGATAGTCTT--TCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATT 390449 Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010 | || || | ||| | | | || ||| |||| | || | | ||| | ||| || | Sbjct 390450 CATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC 390509 Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070 | | || | |||| ||||| || | ||| |||| ||| ||||| || | ||||| Sbjct 390510 CGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTC 390569 Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATC 72128 ||| | || || || || || | |||| ||| ||| || | | ||||| Sbjct 390570 TGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATC 390627 Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188 ||| ||||| ||||| ||||| || || | | | || || | ||||| || || ||||| Sbjct 390628 AGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATC 390687 Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248 | ||| | ||| ||||| || || || | | ||| || ||||||||||| || | ||| Sbjct 390688 AACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACC 390747 Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCC 72308 ||||| || | || ||| || | | |||||| ||| || | || || || Sbjct 390748 GTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACC 390807 Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368 || || | || ||||| | || ||| ||| || ||||| ||||| || || || Sbjct 390808 GCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGA 390867 Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 72428 || || ||||| | || |||||| |||||| || || || ||| || || || Sbjct 390868 GTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTT 390927 Query 72429 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 72488 ||||| || || || ||||| || || || || ||||| |||||||| || || | Sbjct 390928 GAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAG 390987 Query 72489 AGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGG 72548 || ||| || || | || || || || || |||||||| | || ||||||||| Sbjct 390988 CACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGG 391047 Query 72549 TCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608 | ||| ||| || || || | ||||| || ||| | || || ||||| Sbjct 391048 ACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACC 391107 Query 72609 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATA 72668 ||||||||||||| ||||||| ||||| | |||| | || ||||| | ||| || | Sbjct 391108 AAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTG 391167 Query 72669 TTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAG 72727 | | || || ||| | | ||| ||||| || || || || | |||||||||| Sbjct 391168 CTCCATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAG 391226 Query 72728 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 72787 | || ||||||| | | ||||| || ||| | ||| | || | |||| ||| | Sbjct 391227 GGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTAT 391286 Query 72788 GTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 | || || || | || | ||| ||||||| | ||||| || || || Sbjct 391287 GCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq7 Length=1626734 Score = 113 bits (124), Expect = 6e-20 Identities = 378/576 (66%), Gaps = 18/576 (3%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 ||||| ||||| ||||| || || |||| ||||| | | ||||| | ||| || Sbjct 861727 GCAACTGATGCAAGATTGCACACAGCTATCTCATCTGGTGAGCTGTATTGAACAATCTCG 861786 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 ||| || || |||| || || || | |||| |||||| ||||| || || Sbjct 861787 CAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTTTTTATTGCAG 861846 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 | ||||||||| || || || ||| || || |||| ||| || || ||| | || Sbjct 861847 GAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAAAATTTCGCTC 861906 Query 71878 CAGACGACTCGAGCCTTTATTATATT--CTTGTATCT-CTTTT-CTCTTTCGTATTGTGT 71933 || | | | ||||| | | | || | ||||| ||||| ||| | | ||| Sbjct 861907 CAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCTCATAAG-ATTC--- 861962 Query 71934 ATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993 |||||||| ||||||||| || || | || | ||| ||||| ||| | ||| | Sbjct 861963 ATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAACCAGGTGCTTCGTCCGGGGA 862022 Query 71994 CATCAATGAC--CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051 | || ||| || ||| ||| || | || || |||||||| | ||||||||||| Sbjct 862023 AA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCAG 862080 Query 72052 AGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 72110 ||||| ||| || ||||| | | ||| || || ||||| ||||| ||| | Sbjct 862081 AGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTTG 862139 Query 72111 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGC 72168 | || | | ||| ||| ||||||| || || | ||||||| || || | |||||| Sbjct 862140 TAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAAGGCACCCGGC 862197 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 | || || || || ||||| | ||| | ||| ||||| || |||| | | ||| ||| Sbjct 862198 CTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGGA 862257 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATA 72264 | | |||||| || | ||||| | || || ||| Sbjct 862258 ACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080